Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03314 ATGTCGCCGGCGCCGATTAACTTCTCCTCCACCGATACAACTCCACATTCTCCTCTCCATTTCGCTTCTTTCAACGCCGACGCCACCATCCCTTCCGGTTCCACCGCCCGTGGAAAGTCGAGACCGAGACTGACAAAATTGAGGAAACAATCGGCGGCTCAGAACGCAAGGTCTAGAACCAGAACCGTCGATGATGAAGTCTCTGGCTCTGGTTTCGGTTTCAATCCTTTTCGCTCCGATCAGGTAAGTGATAATTTTAAAGGAGTAGAGAGTGATTCAGGTTCTTTTGTGTTTAGTGCTCGAAAAGTTGATTCTGATTCTGTTAGGGATTTGAATTCGGAACAGAAAGAAACAGAGGTTAGGAAAAGTGGCGGTGTTGAATTTGTGTTTAGTGCTAAAGAAATCGATTCTAAATCCAATTTAGTTCTTGATAGAGAGGACAAGAATTGCGAAATAAAAACGTCGAATTCAGAAGGAGAGAAGGGGAAAGTTAATTTTACAGGGTTTGTTTTTGGTGCTGGTAGAAATGATTTGCATTCTAgttttaatatagaaaaaggaaaatcTAGTGTACCTGTAGGGAATTTTGGGGTTGATGATGGTAACGAGAGGGAATGTAAAACTGAATTTGTGTTTGGTGATAAACATAGAGATATTAAAATGTCAAGTTTTAATGTAGAAAAGAAGGAATCTGTTGATAGCATGAGAAATTTGAATAATGGAAGTGGTGTTTTTCGTGCTGTGACGGAAACAAATAGTAGTTTTGATAAAGATGCTGATAAGTGTGGTAATCTGGGTAATGATGTTAAGTCGAAGAGTGGAAAGGGAAGTACTAATGGTTTTACTGCTACTTTTAATGACATTTCTGGTAGTAAATTAGTAGATGAGATAAACAAACTGAACATCAACCATCCTGAGGGTGTCCGTATTGCTAGAGATTTTACGAAGTCAGGTGTAAGTAGTAGCAATGGTTTTGTGTTTGGAGGAAGTGACAAGGTTTCTAATGTTAATTCGGGAACTAATACTAGTGGTGAAAACTTGTATACTAATGTTGATTTTGAGAATATTGGACGGCAATATGCTAAAGCTGGCAGAACAGATGATGTTCAAAATGGAACTGCTTGCGGTATTGCCCAGGATGCTACAGGAATACCTTGTTCTAAGACATCAACCAGTCAGGGTGGGATCAGAGATTTCCAGTGTGGCAAAATTCCAGAATTTCACGTGTCTGAAGATGCTCAAGCGAATGGAGCTGAAGAGTCTTGTACGGACTTTAAACCTCCAGCATGGGATCCTTCTTGTTTTAAAGATAACTTATTTTGTaacctaaataaaaaatttgaatccaCGCGTAAGAGTAAACCTTCCAAAGAAAAAGGATCAAATTTCCTGAGGCGAAAATCGAAGTCACATTCATTGAATAAGAAACAGACAAGGATAGATCATTTGCCAAATGAAAACAGTTCACTTGAAACCCCCGAATCTTCTGGCGGCTTATCTCCGATGGATTTTTCTCCGTATCAAGAAACAGCAGCAGATGATCAAGATCTAAAGGCTTCAGAAGAATTAAATGTGCTGCACCCATCACTGCACCCATCAATTCCCACTGATTATAAAGATGATCTCACCTCGaactctgaaaagaaaaaagctgAATATCATTTTGTTAATGGTCTGGGTGATTCGAAGGAGAAAGATTTTGCATTTTCTGCAGGATCCACTGTAGAGGGTACTTCGTCATTATATAAGCGTAAACAGAAGAAATTTAGGAGGAAAATTGGGTGTGGAAAGCCTGCATCTTCCGTACAATTTTCTTCAATTACCACTCCCAACGTGTCATCACTTTCTGATGTAACGGACAAGTCTCAGATGAATGATCAGCTTGCGGAAGGGGGTGATACGTCAGTGGCTACAATTGAAGCTGCCTGTTACCAATGGAGACTCAGGGGGAACCGTGCTCATAAAGCTAAGGATCTTTCTAAAGCTGAGGAATTCTACACAAAAGGAATAGATTCTGTCCCTTCCAGTGAAAGATCAGGATGCTGCAGTAAGCCTCTTTTACTGTGCTATAGCAACCGTGCAGCAACACGTATTAGTCTTGGAAGGATTAGGGAAGCTCTAGAGGATTGCATGATGGCTACTTCTTTGGACCCCGCCTTTCTGAAAGTACAGATGAGAACAGCTAATTGTCACCTTTTGCTAGGGGAATTTGAAAATGCTCAGCAATGTTATAACAAGTGCCTGGAATCAGGTAAAGTTGTTTGTTTGGATCGGAGAGTAATAGTAGAAGCAGCTGAAGGTTTACAGAAAGCTCAGGAAGTGGTTAAGTGTATGAATGATGCTGCTGAACTTTTGAAGGAGAGGACTTCTGATGCAGCTGGTTCTGCTTTAGAACTTCTTACAAAGGCATTGTCAAAGAGTTTATACTCAGAAAGATTGCTCCAAATGAAGGCCGAGGCTCTGTATTTGCTTCAAAAGTATGATGCTGCAATTCAGCTGTGTGAACAGAGTCTGAAGCTTGCAGAAAAGAATTTTGCCTCGGCAAACAATTCCAATAATTCCACGCATGATAGTTACTCTAGTGTAAAATTGTGGAGATGGGCATTGATATCAAAGTGTTACTTTCGTTTGGGGAGGCTGGATGCATCACttaatattattgaaaaattgCGGCAAACAGCATCTGTCAATGacaaGTGTGTGATTGATAACAGTGAAGACTTGATGTCATTAGCTGCTACTATACACGAACTTCTAGACCACAGGAGAGCAGGAAATGAGAACTTTAAATTGGGAAAGTATGCAGCAGCAGTAGAGAACTACACTGCTGCTTTATCTAGTAATATCAAATCACGCCCTTTTGCAGCAATATGTTTTGGCAACCGTGCTGCTGCTCATCAAGCTTCGGGCCAACTTGCTGATGCCATTGCTGACTGCAGCATGGCTATGGCCCTTGATGGAAATTATGCAAAGGCAATATCTAGAAGAGCCACGTTGCATGAGATGGTTAGAGATTATGAACAAGCAGCTTGTGACCTCAGGAGACTTATTTCTGTTCTTGGATCTCAATCCAATGAAAAGGCCAAACACTCTGACTCACCAAATGGATCAACCAGTGGGAAAGAATCAAGGCAAGCTCAACAACGTCTGCTTACTGTGGAAGATCAAGCCAAAATGGGGACCCCCTTGGACTTTTATCTCATTTTAGGAATTAAACCAGCTGATACAGCAGCTGATATCAAGAAGGCCTATCACAAGGCAGCTCTCAGACATCATCCAGATAAGGCTGGTCAGTTGTTGGCAAGAAGTGAAGTTGGGGATGAAGGCCATGTATGGAAGGAAATTTCTCAGGAGGTGCACAAGGATGCTGATAGGCTTTTCAAAATGATTGGAGAGGCATATGCTGTACTTTCAGACACTGCCAAGCGCTCGGAGTATGATATGGAAGAGGACATAAGGAAAGCTTATAAACATAGCAATGGAGGTAGCGCAGGCAGGAGATCTTCAGACGTTTATGGGAATGGAAGATCATCTGATGGTTATAGATCTGCCTATGACAGAACTTCTAACAGACGATATGGACATCATTGGAGGACATATGGAGATTCATATTCTCGATGGTAA 3624 0.4062 MSPAPINFSSTDTTPHSPLHFASFNADATIPSGSTARGKSRPRLTKLRKQSAAQNARSRTRTVDDEVSGSGFGFNPFRSDQVSDNFKGVESDSGSFVFSARKVDSDSVRDLNSEQKETEVRKSGGVEFVFSAKEIDSKSNLVLDREDKNCEIKTSNSEGEKGKVNFTGFVFGAGRNDLHSSFNIEKGKSSVPVGNFGVDDGNERECKTEFVFGDKHRDIKMSSFNVEKKESVDSMRNLNNGSGVFRAVTETNSSFDKDADKCGNLGNDVKSKSGKGSTNGFTATFNDISGSKLVDEINKLNINHPEGVRIARDFTKSGVSSSNGFVFGGSDKVSNVNSGTNTSGENLYTNVDFENIGRQYAKAGRTDDVQNGTACGIAQDATGIPCSKTSTSQGGIRDFQCGKIPEFHVSEDAQANGAEESCTDFKPPAWDPSCFKDNLFCNLNKKFESTRKSKPSKEKGSNFLRRKSKSHSLNKKQTRIDHLPNENSSLETPESSGGLSPMDFSPYQETAADDQDLKASEELNVLHPSLHPSIPTDYKDDLTSNSEKKKAEYHFVNGLGDSKEKDFAFSAGSTVEGTSSLYKRKQKKFRRKIGCGKPASSVQFSSITTPNVSSLSDVTDKSQMNDQLAEGGDTSVATIEAACYQWRLRGNRAHKAKDLSKAEEFYTKGIDSVPSSERSGCCSKPLLLCYSNRAATRISLGRIREALEDCMMATSLDPAFLKVQMRTANCHLLLGEFENAQQCYNKCLESGKVVCLDRRVIVEAAEGLQKAQEVVKCMNDAAELLKERTSDAAGSALELLTKALSKSLYSERLLQMKAEALYLLQKYDAAIQLCEQSLKLAEKNFASANNSNNSTHDSYSSVKLWRWALISKCYFRLGRLDASLNIIEKLRQTASVNDKCVIDNSEDLMSLAATIHELLDHRRAGNENFKLGKYAAAVENYTAALSSNIKSRPFAAICFGNRAAAHQASGQLADAIADCSMAMALDGNYAKAISRRATLHEMVRDYEQAACDLRRLISVLGSQSNEKAKHSDSPNGSTSGKESRQAQQRLLTVEDQAKMGTPLDFYLILGIKPADTAADIKKAYHKAALRHHPDKAGQLLARSEVGDEGHVWKEISQEVHKDADRLFKMIGEAYAVLSDTAKRSEYDMEEDIRKAYKHSNGGSAGRRSSDVYGNGRSSDGYRSAYDRTSNRRYGHHWRTYGDSYSRW 1207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03314 1207 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 412 1207 - -
Tsu07g03314 1207 MobiDBLite consensus disorder prediction 450 513 - -
Tsu07g03314 1207 Gene3D Tetratricopeptide repeat domain 763 908 IPR011990 GO:0005515
Tsu07g03314 1207 Gene3D Tetratricopeptide repeat domain 917 1037 IPR011990 GO:0005515
Tsu07g03314 1207 Gene3D Tetratricopeptide repeat domain 642 759 IPR011990 GO:0005515
Tsu07g03314 1207 SUPERFAMILY Chaperone J-domain 1041 1146 IPR036869 -
Tsu07g03314 1207 ProSitePatterns Nt-dnaJ domain signature. 1127 1146 IPR018253 -
Tsu07g03314 1207 MobiDBLite consensus disorder prediction 25 70 - -
Tsu07g03314 1207 MobiDBLite consensus disorder prediction 450 465 - -
Tsu07g03314 1207 SUPERFAMILY TPR-like 921 1019 IPR011990 GO:0005515
Tsu07g03314 1207 MobiDBLite consensus disorder prediction 1162 1184 - -
Tsu07g03314 1207 CDD DnaJ 1064 1139 IPR001623 -
Tsu07g03314 1207 Gene3D DnaJ domain 1051 1165 IPR036869 -
Tsu07g03314 1207 ProSiteProfiles dnaJ domain profile. 1064 1150 IPR001623 -
Tsu07g03314 1207 MobiDBLite consensus disorder prediction 1 20 - -
Tsu07g03314 1207 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 14 419 - -
Tsu07g03314 1207 SMART dnaj_3 1063 1142 IPR001623 -
Tsu07g03314 1207 Coils Coil 824 844 - -
Tsu07g03314 1207 Coils Coil 768 788 - -
Tsu07g03314 1207 SUPERFAMILY TPR-like 645 840 IPR011990 GO:0005515
Tsu07g03314 1207 MobiDBLite consensus disorder prediction 1157 1185 - -
Tsu07g03314 1207 MobiDBLite consensus disorder prediction 1023 1047 - -
Tsu07g03314 1207 MobiDBLite consensus disorder prediction 483 503 - -
Tsu07g03314 1207 Pfam Tetratricopeptide repeat 812 844 IPR019734 GO:0005515
Tsu07g03314 1207 Pfam Tetratricopeptide repeat 728 749 IPR019734 GO:0005515
Tsu07g03314 1207 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 14 419 - -
Tsu07g03314 1207 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 412 1207 - -
Tsu07g03314 1207 PRINTS DnaJ domain signature 1122 1142 IPR001623 -
Tsu07g03314 1207 PRINTS DnaJ domain signature 1066 1084 IPR001623 -
Tsu07g03314 1207 PRINTS DnaJ domain signature 1084 1099 IPR001623 -
Tsu07g03314 1207 SMART tpr_5 956 989 IPR019734 GO:0005515
Tsu07g03314 1207 SMART tpr_5 687 720 IPR019734 GO:0005515
Tsu07g03314 1207 SMART tpr_5 990 1023 IPR019734 GO:0005515
Tsu07g03314 1207 SMART tpr_5 721 754 IPR019734 GO:0005515
Tsu07g03314 1207 SMART tpr_5 811 844 IPR019734 GO:0005515
Tsu07g03314 1207 SMART tpr_5 643 676 IPR019734 GO:0005515
Tsu07g03314 1207 SMART tpr_5 918 951 IPR019734 GO:0005515
Tsu07g03314 1207 Pfam DnaJ domain 1064 1147 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03314 Tsu-Chr7 39557087 39567115 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03314 K09527 - gmx:100809278 1402.11