Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03311 atgaaaataattatacTTCTAATCTTTAGTTTTATTCTAAACAGAGCTGACTCAGGCTGTAACAATTCTCTTACAACTTCATTAGTTCCAATTCCACCCTATGAAATCCTCTTATCACTGCAATCACAATCCCTTGATGGCCACTTGAGCTTAACGGACAATGAAGGTGCTGCCAAGGACTTTGGTAACATACACCATTTTCCTCCTCTAGCAGTGTTGCATCCAAAAACTGTTTCGGATATTTCACGAACCGTGaagtatatttttgaaaaaggaTCTGATTCAGAGTTGAAAATTGCTGCTAGAGGTCATGGACATTCACTTCAAGGTCAGGCACAAGCACATCAAGGACTAGTTATCAGCATGGAGTCACTAAAGGTTCCTGATATGAAGATTCACACCGGTGAATTTCCTTTTGTCGATGTCTCAGCTGGTGAGTTGTGGATAAACATTCTGCATGAGACTCTTCAATATGGATTGGCACCAAACTCTTGGACAGATTATCTTCACCTCACTGTTGGAGGCACTCTTTCAAATGCTGGAGTAAGTGGACAAACTTTTAGGCATGGACCTCAGATCAATAACATCTTCCAGTTGGAAGTTGTCACAGGAAAAGGAGAGGTGGTTACCTGCTCAGAAAACCGAAATGCCGACCTTTTTCATGGTGTTCTTGGAGGGCTTGGTCAATTTGGCATCATCACCAGAGCTAGAATTTCTCTTGAACCAGCACCAAAGATGGTGAAATGGATTAGGGTGCTGTATTCAGATTTCTCTGCATTTACAAGGGATCAAGATAATTTGATATCACTCAACGACACATTTGATTATATTGAAGGATTTGTAATCATAAATAAAACAGGCATTCTTAATGGTTGGAGACTATCTTTCGACCCCAAAGACCCACTTCAAGCCAGCCAATTCAATTCAGATGAGAAAACTTTCTACTGTCTTGAGATGGCAAAATACTTCAACCCTGATGAAGCTGAAATCATGAATCAGGGTGTTGATCACCTACTGTCACAATTGAGTTATATTCCAGCCACACTGTTCCTATCAGAAGTTTCTTACGTGGAATTTTTAGACAGAGTGCATGTTTCTGAGATGAAGTTAAGAGCACAAGGCTTATGGGAAGTTCACCATCCTTGGCTGAACCTTCTGATCCCAAGAAGTAAGATTCATAACTTTGCTGAAGAAGTATTTGGCAATATTCTCAAGGACACAAGTAATGGTCCCGTACTCATTTACCCTGTCAATCAAACAAGGTGGAACAGTAAAACATCTTTTGTCACCCCAGAGGAAGATGTTTTCTACCTAGTAGCATTCTTAACATCAGCAGTCCCATTTTCAACTGGTGAAAACAGTTTAGAATACATTCTAAACCAAAACAAAAGGATCCTAGATTTCTGCACCAATGCTCAACTACATGTGAAGCAATATCTTGCTCATTACAGCACACAGGAAGAATGGCAAACTCACTTTGGGTCAAAATGGGGGTCATTTGTGGAAAGAAAAAGAGCCTATGACCCACTAGCACTACTTGCACCTGGCCATAGAATCTTTCAAAAGGCAATGTCCACCTCCATTTAG 1587 0.3982 MKIIILLIFSFILNRADSGCNNSLTTSLVPIPPYEILLSLQSQSLDGHLSLTDNEGAAKDFGNIHHFPPLAVLHPKTVSDISRTVKYIFEKGSDSELKIAARGHGHSLQGQAQAHQGLVISMESLKVPDMKIHTGEFPFVDVSAGELWINILHETLQYGLAPNSWTDYLHLTVGGTLSNAGVSGQTFRHGPQINNIFQLEVVTGKGEVVTCSENRNADLFHGVLGGLGQFGIITRARISLEPAPKMVKWIRVLYSDFSAFTRDQDNLISLNDTFDYIEGFVIINKTGILNGWRLSFDPKDPLQASQFNSDEKTFYCLEMAKYFNPDEAEIMNQGVDHLLSQLSYIPATLFLSEVSYVEFLDRVHVSEMKLRAQGLWEVHHPWLNLLIPRSKIHNFAEEVFGNILKDTSNGPVLIYPVNQTRWNSKTSFVTPEEDVFYLVAFLTSAVPFSTGENSLEYILNQNKRILDFCTNAQLHVKQYLAHYSTQEEWQTHFGSKWGSFVERKRAYDPLALLAPGHRIFQKAMSTSI 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03311 528 Gene3D - 122 245 IPR016169 -
Tsu07g03311 528 ProSiteProfiles PCMH-type FAD-binding domain profile. 65 243 IPR016166 GO:0071949
Tsu07g03311 528 SUPERFAMILY FAD-binding/transporter-associated domain-like 54 242 IPR036318 GO:0050660
Tsu07g03311 528 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 69 104 IPR006093 GO:0016491
Tsu07g03311 528 SUPERFAMILY FAD-linked oxidases, C-terminal domain 244 520 IPR016164 GO:0003824|GO:0050660
Tsu07g03311 528 Gene3D - 246 479 IPR016170 -
Tsu07g03311 528 PANTHER CYTOKININ OXIDASE/DEHYDROGENASE-LIKE PROTEIN 4 525 - -
Tsu07g03311 528 PANTHER GULONOLACTONE OXIDASE 4 525 - -
Tsu07g03311 528 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 244 520 IPR015345 GO:0009690|GO:0019139|GO:0050660
Tsu07g03311 528 Pfam FAD binding domain 69 212 IPR006094 GO:0050660
Tsu07g03311 528 Gene3D - 54 520 IPR016167 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03311 Tsu-Chr7 39550174 39552535 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03311 K00279 - gmx:100777568 872.078