Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03294 ATGGCAATTTTGTTCTCCACAATTCTACTTCCTTCCACTAACCTCACTTCAAAACTACCCATCTTCAACCCACAACATCACGCATTTCAATCTCTTCGCCATTTCACagATACTACACCCAGAAGAGATAGTAGAAACCCATTTCATAAAGCTTCATCTTTTATTGCTTTTGCGGTGAACGGTAACCCCGCCATAAGAAAAACCACACCCAGAAGAGATAGTAGAAACCCAGTTTTGAGTGAAGGTagagatgaagatgaagctCTTGGACCCATTTGCCCTGGTTGTGGAATTTTCATGCAAGATAAAGATCAAAACCTTCCTGGGTTTTACCAACAAAGAGAGGTTAAAGTTGAAAATTTTACTGAAGAGGATTATGTGTTTGATGAAGATGTAGAAGAAGAACACGACGATGACGAccatgatgattatgatgaagaGGGTGTAGAAGAAGTTAAGGGGTCAATTGATGAGTTTGATGAGTTAGAAGCTATGTTACTTGGTGAAGAAAATGATGTTGAGCTTGATTTAGATGGGTTTAAACATGCAGGGGTTGGTTATGGTAATGTTACTGAGGAGGTTTTGGAGAGGGCAAGGAGGAAGAAGGTATCAAAGGCTGAGAAGAAGAGAATGGCTAGAGAAGCTGAAAAGGTGAAAGAAGAGGTTACTGTTTGTGCTAGGTGTCATTCCTTGAGAAATTATGGGCAGGTGAAGAATAATACAGCTGAGAATTTGATACCTGATTTTGATTTCGATAGGTTGATTTCGACTAGGTTGATGAATCCTGCTGGTAGTGGTAGTTCTACTGTTGTTGTTATGGTTGTTGATTGTGTTGATTTTGATGGTTCTTTCCCGAGAACGGCTGTGAAATCATTGTTTAAAACGCTGGAAGGTATTCAGGAGAATTCGAAGAAGGGTAAGAGATTGCCGAAGCTTGTTCTTGTGGCTACTAAGGTTGATCTACTTCCATCTCAGGTTTCTCCTACGAGATTGGATAGATGGGTTCGACATCGTGCAAGTGCTGGAGGAGCGCCTAAGTTAAGTGCGGTTTATTTGGTTAGTTCTCGAAAGGATTTGGGAGTGAGGAATGTGTTGTCGTTCGTAAAGACTTTGGCTGGTCCTCGTGGGAATGTGTGGGTGATTGGTGCTCAAAATGCTGGGAAGTCTACTTTAATCAATGCGTTTGCGAAGAAAGAAGGAGCCAAAGTTACAAAGCTCACAGAAGCTCCTGTTCCTGGGACGACGCTTGGGATATTGAGAATTGGAGGAATTTTGTCGGCTAAAGCTAAGATGTTTGATACTCCAGGGCTCTTGCATCCGTATTTACTGTCGATGAGATTGAACCGAGAGGAACAAAGGATGATTGAGATACGGAAGGAACTTCGACCTCGAACATATAGAATTAAGGCAGGACAAGCTATACATGTTGGTGGCTTGGCAAGACTTGACCTCATTGAAGCCTCCGTTGAAACAATGTATGTCACAGTTTGGGCATCACCAAATGTTTCTCTACACATGGGAAAAATTGAAAACGCTAATGAGATTTGGAATAATCATGTTGGTGTCAGGCTGCagCCTCCCATCGGTAATGACCGCGGAGCAGAACTAGGTACATGGAAAGAAAGGGAAGTAAAAGTATCTGGAACAAGTTGGGATGTCAACTGCATGGACATATCAATAGCTGGTTTCGGTTGGTTCTCTTTAGGTCTTCAAGGTGAAGCAACCATGAAATTATGGACCTATGACGGAGTTGAAATAACTTTGAGAGAACCATTGGTACTTGACCGGGCCCCATCTCCTGAGAAACCAGGTTTTTGGTTACCAAAAGCTATATCTGAAGCTATTGGTAACCAAACTAAACTTGAAgctcaaagaaagaaaaaacttgaaGACGAAGATACAGAATTGGTAGGAGCAGGGTCAGAGATATCTGCATGA 1938 0.4071 MAILFSTILLPSTNLTSKLPIFNPQHHAFQSLRHFTDTTPRRDSRNPFHKASSFIAFAVNGNPAIRKTTPRRDSRNPVLSEGRDEDEALGPICPGCGIFMQDKDQNLPGFYQQREVKVENFTEEDYVFDEDVEEEHDDDDHDDYDEEGVEEVKGSIDEFDELEAMLLGEENDVELDLDGFKHAGVGYGNVTEEVLERARRKKVSKAEKKRMAREAEKVKEEVTVCARCHSLRNYGQVKNNTAENLIPDFDFDRLISTRLMNPAGSGSSTVVVMVVDCVDFDGSFPRTAVKSLFKTLEGIQENSKKGKRLPKLVLVATKVDLLPSQVSPTRLDRWVRHRASAGGAPKLSAVYLVSSRKDLGVRNVLSFVKTLAGPRGNVWVIGAQNAGKSTLINAFAKKEGAKVTKLTEAPVPGTTLGILRIGGILSAKAKMFDTPGLLHPYLLSMRLNREEQRMIEIRKELRPRTYRIKAGQAIHVGGLARLDLIEASVETMYVTVWASPNVSLHMGKIENANEIWNNHVGVRLQPPIGNDRGAELGTWKEREVKVSGTSWDVNCMDISIAGFGWFSLGLQGEATMKLWTYDGVEITLREPLVLDRAPSPEKPGFWLPKAISEAIGNQTKLEAQRKKKLEDEDTELVGAGSEISA 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03294 645 Gene3D - 264 440 IPR027417 -
Tsu07g03294 645 MobiDBLite consensus disorder prediction 622 645 - -
Tsu07g03294 645 Pfam 50S ribosome-binding GTPase 378 452 IPR006073 GO:0005525
Tsu07g03294 645 CDD YqeH 225 437 - -
Tsu07g03294 645 PANTHER GENETIC INTERACTOR OF PROHIBITINS 3, MITOCHONDRIAL 31 635 - -
Tsu07g03294 645 MobiDBLite consensus disorder prediction 65 86 - -
Tsu07g03294 645 PANTHER GTP-BINDING PROTEIN BRASSINAZOLE INSENSITIVE PALE GREEN 2, CHLOROPLASTIC 31 635 - -
Tsu07g03294 645 Coils Coil 201 221 - -
Tsu07g03294 645 MobiDBLite consensus disorder prediction 68 86 - -
Tsu07g03294 645 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 268 487 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03294 Tsu-Chr7 39282835 39287282 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03294 - - gmx:100805561 924.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03294 07 39282835 39287282 Tsu07g03294 07 39282835 39287282 ECH