Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03280 ATGGGATCTGAAACTGAGTCTCAAATAATTCCTGTCGTTGACTTCTCCGACCAAAACATGAAACCTGGTACCAACACATGGCTCTCAGCTTGCAATGTTGTGAGAACTTCACTAGAAGACTATGGTTGTTTCGTGGCAAAATATGATAAAGTTGGCAAAGATCTTTGCAACTCTGTTGTGTCTTCAATTGAAGAATTATTTTGTCTCCCTTTGGaaacaaaaaagcaaaagaCAAGTGATAGACCTTTTCATGGTTACATAGGACAAGTCTCATGGCTTCCATTATATGAATCTATGGCCATTGAAAATCCATTAACTATGCTTCAATGTCAAAAATTTGCCCAAATCATGTGGCCTCAAGGGAATCATGGTTTCTGTGATATCATGAATGAGTACTCTAAGCTATTGGGAGAATTAGACCATATAGCAAAAAGGATGGTGTTTGAAAGCTATGGTGTGGatatgaaaataagtgattCATTGATAGAATCAAGCAATTATCTCCTAAGATGCTTAAAATACAGACCACGTGAGATAGATGAGAAAGATATAGGATTGCAACCTCACTCTGACTTAACAATTATATCAGTAGTTCATCAGCTCAATAATTTAAATGGTTTGGAAATCAAATTGAAGAATGGAGATTGGATTGGGATTCATGCCTCACCCTCTTCCTTTGTTGTCATGGCAGGTGATGCATTCAAGGTGTTGAGTAATGGGAGAATAAGTACATGTGAACACAGAGTTATAatgaatgaaaagaaaacaagatACTCAACGGGACTATTTTCTTTTGCTAATAAGATTATGGATATACCAAAAGAGCTTATCAATGAGGAACATCCCTTGCGTTACAAACCAACATTTGACAATTATGATTATCTTCGTTTCTatgagaaagaaagaatcaaCGAACCTAGTACACGAATTGAAGCTTATTGtggaattaattaa 954 0.3375 MGSETESQIIPVVDFSDQNMKPGTNTWLSACNVVRTSLEDYGCFVAKYDKVGKDLCNSVVSSIEELFCLPLETKKQKTSDRPFHGYIGQVSWLPLYESMAIENPLTMLQCQKFAQIMWPQGNHGFCDIMNEYSKLLGELDHIAKRMVFESYGVDMKISDSLIESSNYLLRCLKYRPREIDEKDIGLQPHSDLTIISVVHQLNNLNGLEIKLKNGDWIGIHASPSSFVVMAGDAFKVLSNGRISTCEHRVIMNEKKTRYSTGLFSFANKIMDIPKELINEEHPLRYKPTFDNYDYLRFYEKERINEPSTRIEAYCGIN 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03280 317 Pfam 2OG-Fe(II) oxygenase superfamily 171 263 IPR044861 -
Tsu07g03280 317 Gene3D - 8 315 IPR027443 -
Tsu07g03280 317 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 164 268 IPR005123 -
Tsu07g03280 317 SUPERFAMILY Clavaminate synthase-like 8 302 - -
Tsu07g03280 317 Pfam non-haem dioxygenase in morphine synthesis N-terminal 10 88 IPR026992 -
Tsu07g03280 317 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 3 315 - -
Tsu07g03280 317 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03280 Tsu-Chr7 39190751 39193156 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03280 127 288 Glycosyltransferase AT5G59530 30.357 4.36e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03280 - - gmx:100791791 484.182