Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03276 atggatCATATTAGTAATGAAGCTAGTGTAGATCGTTTTCCAATTGGTCCTTCAGACATTCTTGGTAAGACAATTGCTTTTAGGGTTCTATTCTGCAAATCTATGTCACATTTGAGGTATCAAATATTTCAATTGTTGTTAGGGTTCTTGTATAAGTTTAAAGGGGTGTTGAAATTGAAACCCTTTTTATCATGGTTTCATCCGAGAAACCCACAAGGGATATTAGCAATGATGACAATAGTTGCTATATTGTTGAAACGTTACACGAATGTGAAAGTTAGGGCTGAAATGGCATATAGGAGGAAATTTTGGAGAAACATGATGAGAAGTGCTTTGACTTATGATGAATGGGCTCATGGGGCTATGATGCTTGATAAATTGACACCAAAGATGAATGAATCGGATCTTTATGATGTTGAATTGGTGAGGAACAAGCTTCAAGAGCTTCGTCACCGTCGACAAGAGGGGTCAATTAGAGATATTATGTTTTGTATGCGTGCTGATCTTGTTCGAAATTTAGGCAATATGTGTAACCCTGAATTGCACAAGGGTAGGCTTCAAGTTCCTAAATTAATCAAGGAGTATCTTGATGAGGTATCAACACAGTTGAGAATGGTTTGTGATTCGGATTCGGAGGAGCTGTCGTTAGAAGAAAAGCATGCTTTCATGCATGAAACTAGACATGCTTTTGGGAGAACCGCTTTGCTTTTAAGTGGTGGTGCTTCTCTTGGAGCTTTTCATGTTGGTGTAGTTAAAACACTGGTGAAACATAGACTCTTGCCTAGGATAGTTGCCGGTTCAAGCGTTGGATCCATTATGTGTGCTATTGTTGCCACTAGATCATGGCCAGAACTTCAGAGTTTCTTTGAGGATTCATTGCATTCATTGCAATTTTTCGATCAAATGGGTGGGATTTTCGCGGTTGTCAAGAGGGTCGCAATGCGCGGAGCTGTTCACGAGATCAGGCAGTTGCAAATGTTGTTGAGGCATTTAACAAACAACCTTACATTTCAAGAAGCTTATGATATGACAGGCAGAGTTCTTGGAATTACGGTTTGCTCCCCAAGGAAGCATGAACCTCCTAGATGTCTTAACTACTTGACGTCACCTCACGTGGTTATATGGAGTGCGGTAACCGCTTCTTGTGCATTCCCTGGCCTTTTTGAAGCTCAAGAATTGATGGCAAAGAATAGAAGCGGAGATATTGTTCCTTACCATCCTCCTTTTAATCTAGGTCCTGAAGAAGGCTCCACACCGTCGCGCCGGTGGAGGGATGGTAGCTTAGAGATTGATTTACCTATGATGCAGTTGAAGGAGCTATTCAATGTCAATCATTTCATTGTCAGTCAGGCCAACCCTCACATTGCACCATTGTTGAGATTGAAAGAGTTTGTAAGAACTTATGGAGGCAATTTTGCTGCCAAGCTTGCTCACCTTGTGGTGATGGAGGTGAAACATAGGTGTAATCAAGTACTGGAACTTGGCTTTCCCTTAGGTGGACTTGCCAAACTGTTTGCTCAAGAATGGGAAGGTGATGTCACTATTGTTATGCCTGCTACCGTTTCTCAGTACTTAAAGATTATACAGAACCCTTCTTTAGGAGAGCTTCAAAAAGCAGCCAACCAAGGGAGAAGATGTAGCTGGGAGAAGCTTTCAGCCATAAAAGCAAATTGTGAAATTGAGCTTGCTCTTGATGATTCTGTAGCACGTGTCAATCATATGAGAAGACTAAAACGAATGTCTGAGAGAACTGCTTCTGCCTCTCATGGTTTGCCAAGTACTGTCAGATTCAGCGCTTCAAGAAGAATTCCTTCTTGGAATTGCTTGGCACGAGAGAATTCGGCAAGTTCTCTTGAAGACCTTACAGATGCTGCCTCCTCGTTGCATCAAGCCATTGGCAGTGACTCTGAAAATGTTGAATCGATTTCTTGGACAAGATCTGGTGGCCCTTTGATGAGAACCGCTTCAGCAAATATGTTCGTTGACTTTCTCCAAAACTTAGAGGTTGTTGATACCGAACTAAATAGAGGTGTGGTGGCTCATGCTAGCCCTCGTGATTTTCAGTATCATAGTTTCAGACTCACAGGACCAGATAGGAATTCAGAAGCTGAGCAGAAGGAAATTGACAACAGGGTTGCGAATGGATCTAGCATTGTGATAACCGAAGGTGATCTTTTGCAGACTGAAAAGATTCATAACGGGATTGTGTTTAATGTTGTCAAGAAAGAAGCCTTAACACCTTCGGATAGATGTCATGATTTTGGAAATTACAACAATGAAGTTGTTGAATGCGATCAAATCGACAGTCCAGGGAAGGAGATGGATACTGCTAGCTCTGATTCTGACTATGAAAATGGTGAATCCACACCTGCTTTGAGCTTTGATCAAAACACTGTTGATAGTAGTTAG 2409 0.4151 MDHISNEASVDRFPIGPSDILGKTIAFRVLFCKSMSHLRYQIFQLLLGFLYKFKGVLKLKPFLSWFHPRNPQGILAMMTIVAILLKRYTNVKVRAEMAYRRKFWRNMMRSALTYDEWAHGAMMLDKLTPKMNESDLYDVELVRNKLQELRHRRQEGSIRDIMFCMRADLVRNLGNMCNPELHKGRLQVPKLIKEYLDEVSTQLRMVCDSDSEELSLEEKHAFMHETRHAFGRTALLLSGGASLGAFHVGVVKTLVKHRLLPRIVAGSSVGSIMCAIVATRSWPELQSFFEDSLHSLQFFDQMGGIFAVVKRVAMRGAVHEIRQLQMLLRHLTNNLTFQEAYDMTGRVLGITVCSPRKHEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKNRSGDIVPYHPPFNLGPEEGSTPSRRWRDGSLEIDLPMMQLKELFNVNHFIVSQANPHIAPLLRLKEFVRTYGGNFAAKLAHLVVMEVKHRCNQVLELGFPLGGLAKLFAQEWEGDVTIVMPATVSQYLKIIQNPSLGELQKAANQGRRCSWEKLSAIKANCEIELALDDSVARVNHMRRLKRMSERTASASHGLPSTVRFSASRRIPSWNCLARENSASSLEDLTDAASSLHQAIGSDSENVESISWTRSGGPLMRTASANMFVDFLQNLEVVDTELNRGVVAHASPRDFQYHSFRLTGPDRNSEAEQKEIDNRVANGSSIVITEGDLLQTEKIHNGIVFNVVKKEALTPSDRCHDFGNYNNEVVECDQIDSPGKEMDTASSDSDYENGESTPALSFDQNTVDSS 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03276 802 CDD Pat_SDP1-like 165 572 - -
Tsu07g03276 802 Gene3D Cytosolic phospholipase A2 catalytic domain 232 319 - -
Tsu07g03276 802 Gene3D Cytosolic phospholipase A2 catalytic domain 320 491 - -
Tsu07g03276 802 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 1 688 - -
Tsu07g03276 802 Pfam Patatin-like phospholipase 235 427 IPR002641 GO:0006629
Tsu07g03276 802 MobiDBLite consensus disorder prediction 780 802 - -
Tsu07g03276 802 MobiDBLite consensus disorder prediction 765 802 - -
Tsu07g03276 802 SUPERFAMILY FabD/lysophospholipase-like 231 575 IPR016035 -
Tsu07g03276 802 PANTHER TRIACYLGLYCEROL LIPASE-RELATED 1 688 - -
Tsu07g03276 802 Pfam Domain of unknown function (DUF3336) 97 228 IPR021771 GO:0004806|GO:0006629
Tsu07g03276 802 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 235 438 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03276 Tsu-Chr7 39158220 39162273 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03276 4 778 Acyl Lipid Metabolism Gene Families AT5G04040 73.408 0.0 1187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03276 K14674 - gmx:100816093 1294.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03276 07 39158220 39162273 Tsu07g03276 07 39158220 39162273 ECH
Tsu07g03276 07 39158220 39162273 Tsu01g01792 01 17946051 17952056 PCT