Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03271 ATGGCCGTTATGATGAGTCGTTTCCGTGTTCTAACTTCCAAATCCAACTCACTAACGTCACTCATCAAATTATCCCGCCGTTCACCGTCGTACTCCTCCTCTGCTGCGGTGGTGACTGAAGAACATGACACCACCAGCACTTTTTTGAAAGATTATGCTGATTATAGAAGATCTCTTTACGGTCCAATCACTCATAAAGCTCTTCTTGTTGATGCTGTTGGTACTCTTGTTCTTCCTTCTCAACCTATGGCTCAGATATATAGGGAGATTGGGGAGAAATATGGTGTGGAGTATTCAGAGAAAGAGATTTTGCATAGATACAGAAGAGCTTATAGTCAGCCTTGGGGTAAATCTCGTCTCAGATATGTAAATGATGGTAGGCCTTTCTGGCAATACATAGTGAGGCAATCTACTGGCTGTTCAGATGCTCAGTACTTTGAAGAGCTTTATAACTACTATACGACAGACAAGGCATGGCACCTATGTGACCCTAATGCAGGAGAAGTGTTCAAAGCTCTTAGAAAATCAGGTGTAAAATTGGCCGTTGTGTCAAATTTTGACACTCGGTTAAGACCACTCCTGCGGGCATTAAATTGTGATGATTGGTTTGATGCTGTAGCAGTATCAGCTGAGGTTGAAGCAGAGAAACCAAATCCAACTATATTTCTTAAAGCGTGTGAACTATTGGATGTAAAACCTGAGGATGCTGTTCATGTTGGGGATGATCGACGAAATGATATATGGGGTGCTAGAGATGCAGGCTGTGATGCTTGGCTTTGGGGAAGTGATGTTCACTCTTTTAAGGAGGTAGCAGAGAGGATTGGGGTCCAGGTCTGA 837 0.4313 MAVMMSRFRVLTSKSNSLTSLIKLSRRSPSYSSSAAVVTEEHDTTSTFLKDYADYRRSLYGPITHKALLVDAVGTLVLPSQPMAQIYREIGEKYGVEYSEKEILHRYRRAYSQPWGKSRLRYVNDGRPFWQYIVRQSTGCSDAQYFEELYNYYTTDKAWHLCDPNAGEVFKALRKSGVKLAVVSNFDTRLRPLLRALNCDDWFDAVAVSAEVEAEKPNPTIFLKACELLDVKPEDAVHVGDDRRNDIWGARDAGCDAWLWGSDVHSFKEVAERIGVQV 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03271 278 CDD HAD_dREG-2_like 166 277 - -
Tsu07g03271 278 PANTHER - 20 278 - -
Tsu07g03271 278 Gene3D - 81 154 IPR044924 -
Tsu07g03271 278 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 156 256 IPR006439 -
Tsu07g03271 278 Gene3D - 70 262 IPR023214 -
Tsu07g03271 278 Pfam Haloacid dehalogenase-like hydrolase 74 257 IPR041492 -
Tsu07g03271 278 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 221 241 IPR006439 -
Tsu07g03271 278 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 173 186 IPR006439 -
Tsu07g03271 278 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 203 219 IPR006439 -
Tsu07g03271 278 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 65 76 IPR006439 -
Tsu07g03271 278 TIGRFAM HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 174 254 IPR006439 -
Tsu07g03271 278 SUPERFAMILY HAD-like 66 268 IPR036412 -
Tsu07g03271 278 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 66 260 - -
Tsu07g03271 278 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 20 278 - -
Tsu07g03271 278 TIGRFAM DREG-2: HAD hydrolase, REG-2-like, family IA 66 259 IPR011949 -
Tsu07g03271 278 SFLD Haloacid Dehalogenase 66 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03271 Tsu-Chr7 39095657 39100340 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03271 - - gmx:100789672 452.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03271 07 39095657 39100340 Tsu07g03271 07 39095657 39100340 ECH