Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03266 atGGCAGAGAATGGAACACACACCACCGAATCTACAGTAACCACCATAACCCCAATGGAAATTGAAAATGGAAACGTAGATtcaacaacacaacaacaacaaccacaagaACCACCAAAATGTTTAATCACAAAATTAGACAATGGAACCATAGAGAGTCATCGTTACTACTTATCTCGCAAAACAACACTTGAGATGCTCAAAGATAGAGGTTACTCTATCCCTTCTGATGAAATCCAGCTTTCTCTTTATGACTTTCGTCAAATTCACGGTCAATCTCCTGATGTTGATCGTCTCCGTTTCACTGCTACTCATACTACTGATCCCTCTAAAAGGATTTTGGTGATTTTTAGTGGACCTGGTATTGTGAAAGTGAATGTGATTAGAAACATTGCTGGACAAATTGTGAATAGAGATACTTTGACTGGTCTTATTTTGAttgttcaaaatcaaattactAGTCAAGCTTTGAAAGCTATTAATCTTCTTAATttcaaagttgaaatttttcagATTACAGACTTGCTTGTTAATGTTACAAAGCATGTATTGAAGCCAAAACATCAGGTGCTGACTGATAAGCAGAAAAAAAATCTCCTGAAGAAGTACGATATACAAGAAAAGCAGCTTCCCCGGATGCTACAAACCGATGCAATTGCTCGATATTATGGACTTCAGAGGGGACAAGTAGTCAAAGTTACCTACACCGGTGAAATCACTCAGATGCATGTCACATATCGATGCGTTTGGTGA 753 0.3493 MAENGTHTTESTVTTITPMEIENGNVDSTTQQQQPQEPPKCLITKLDNGTIESHRYYLSRKTTLEMLKDRGYSIPSDEIQLSLYDFRQIHGQSPDVDRLRFTATHTTDPSKRILVIFSGPGIVKVNVIRNIAGQIVNRDTLTGLILIVQNQITSQALKAINLLNFKVEIFQITDLLVNVTKHVLKPKHQVLTDKQKKNLLKKYDIQEKQLPRMLQTDAIARYYGLQRGQVVKVTYTGEITQMHVTYRCVW 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03266 250 Gene3D - 48 174 IPR036710 GO:0003677|GO:0003899|GO:0006351
Tsu07g03266 250 PANTHER DNA-DIRECTED RNA POLYMERASE V SUBUNIT 5A 30 250 - -
Tsu07g03266 250 Pfam RNA polymerase Rpb5, N-terminal domain 52 134 IPR005571 GO:0003677|GO:0003899|GO:0006351
Tsu07g03266 250 SUPERFAMILY Eukaryotic RPB5 N-terminal domain 51 178 IPR036710 GO:0003677|GO:0003899|GO:0006351
Tsu07g03266 250 Gene3D - 175 250 IPR035913 -
Tsu07g03266 250 SUPERFAMILY RPB5-like RNA polymerase subunit 175 250 IPR035913 -
Tsu07g03266 250 Pfam RNA polymerase Rpb5, C-terminal domain 177 249 IPR000783 GO:0003677|GO:0003899|GO:0006351
Tsu07g03266 250 PANTHER DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 30 250 IPR014381 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03266 Tsu-Chr7 38994299 38998061 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03266 K03013 - gmx:100306033 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03266 07 38994299 38998061 Tsu07g03266 07 38994299 38998061 ECH