Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03262 ATGATAAAAATGGATACTTTACTCAAAACACCTAACAAGCTTCAATTTTTACACCCACTTCATCGTTATCCAGAAAAATTGAGCAATTATTCAGCTTCATATAAGTTGCAAAATCATGAATTTAGATTTGGTTCTAAGAAAAAACCAATTTTGAGGGCTAGTAGCAATGCCCTTTTGGAGCTTGTTCCTGAATTTAAGAAGGAGAATTTGGATTTTGAACTTCCTTTGTATGATTCAACAAAGGGAACTGTTGTGGATCTTGCAGTTGTGGGAGGTGGTCCTGCAGGACTTGCTGTAGCACAGCAAGTTTCTGAAGCCGGGCTTTCGGTTTGCGCTATTGATCCAAACCCTAGATTGATTTGGCCTAATAATTATGGTGTTTGGGTGGATGAATTTGAGGCAATGGATTTACTTGATTGCCTTGATAAAACTTGGTCTGGTGCTGTTGTTTATATCGACGATAAAACGAAAAAGGATCTTGATAGACCTTATGGTAGGGTTAATAGGAAGCTTTTGAAGTCAAAGATGCTCCAAAAATGTATATCAAATGGTGTGAAGTTTCATCAAGCTAAAGTTAATAAGGTTATTCACGAGGAATCCAAATCGTTGTTGATTTGCAATGATGGTGTCACGGTTCAGGCTACTGTGGTTCTTGATGCTACTGGCTTTTCAAAATGTTTAGTTCAGTATGATAAACCGTATAATCCGGGTTACCAAGTTGCGTACGGGATTTTGGCTGAGGTTGATGAACATCCGTTTGATGTTGACAAAATGCTTTTTATGGACTGGAGAGATTCGCATTTAGACAATGATATGAAGCTCAAGGAGAGAAATTGTAAAATACCTACTTTTCTGTATGCAATGCCCTTTTCGTCCACAAAGATATTTCTCGAAGAAACCTCGCTCGTTGCTCGCCCTGGGTTACGGATGGATGATATACAGGATAGAATGGTTGCTAGGTTGAAACACTTGGGTATCAATGTGAAAAgcattgaagaagatgaacagtgtgTCATTCCCATGGGTGGCCCTCTCCCGGTTCTCCCTCAGAGAGTTGTTGGAATCGGCGGAACAGCCGGGATGGTGCATCCTTCTACCGGGTATATGGTAGCAAGGACCCTATCTGCAGCTCCTATAGTTGCTAATGCTATTGTTCAGTATCTTGGTTCTGATAGAGGCCTTTTAGGAGACGAAATATCTGCACAGGTATGGAAAGACTTATGGCCGATCGAAAGAAGGCGACAAAGGGAGTTCTTCTGTTTTGGTATGGACGTCTTACTCAAGCTTGATTTACCTGGCACAAGAAGATTTTTCAATGCATTTTTTAATCTGGAACCTTATTATTGGCATGGATTCTTATCATCAAGACTGTATCTTCCTGAGTTGTTTACTTTTGGACTATCTCTATTTTCTTATGCATCAAATACATCTAGGATAGAGATTATGGCAAAGGGAACTCTTCCTTTGGTAAATATGGTCAACAACTTGATAAAAGATAAAGAATAA 1506 0.3878 MIKMDTLLKTPNKLQFLHPLHRYPEKLSNYSASYKLQNHEFRFGSKKKPILRASSNALLELVPEFKKENLDFELPLYDSTKGTVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPNPRLIWPNNYGVWVDEFEAMDLLDCLDKTWSGAVVYIDDKTKKDLDRPYGRVNRKLLKSKMLQKCISNGVKFHQAKVNKVIHEESKSLLICNDGVTVQATVVLDATGFSKCLVQYDKPYNPGYQVAYGILAEVDEHPFDVDKMLFMDWRDSHLDNDMKLKERNCKIPTFLYAMPFSSTKIFLEETSLVARPGLRMDDIQDRMVARLKHLGINVKSIEEDEQCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLSAAPIVANAIVQYLGSDRGLLGDEISAQVWKDLWPIERRRQREFFCFGMDVLLKLDLPGTRRFFNAFFNLEPYYWHGFLSSRLYLPELFTFGLSLFSYASNTSRIEIMAKGTLPLVNMVNNLIKDKE 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03262 501 PANTHER LYCOPENE BETA CYCLASE, CHLOROPLASTIC 9 501 - -
Tsu07g03262 501 SUPERFAMILY FAD/NAD(P)-binding domain 84 467 IPR036188 -
Tsu07g03262 501 TIGRFAM carotene-cycl: lycopene cyclase family protein 86 481 IPR010108 GO:0016117|GO:0016705
Tsu07g03262 501 Gene3D - 83 419 IPR036188 -
Tsu07g03262 501 Pfam Lycopene cyclase protein 86 478 - -
Tsu07g03262 501 PANTHER UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIAL 9 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03262 Tsu-Chr7 38968677 38970563 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03262 K06443 - gmx:100810895 901.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03262 07 38968677 38970563 Tsu07g03262 07 38968677 38970563 ECH