Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03252 ATGGCGCTACACACAGTGTCATCGGTTTCTCAAGTACTTCGTCTCTCCGATACATTTACTTCAATCGGTAACCGTCACTTGCTCGTCGATTTCGCTCCTTTCCGTCGTAAATCATCAAAACGGTATAATCGGAGATTCACGCCGTTTATTTCTCCGGTTAATCTCCGTCGTAATTCTGTCAAAGCTATTCTTCAACTTGATAATCATCTTAATCCTGCTCCTCCTCCTTCTTCTTCGAGTTCCGATTTAAAACCTCAGGTTGCAAACTTGGAGGATATACTATCAGAAAGAGGGGCCTGTGGTGTTGGATTCATTGCCAATTTGGAAAATAAAGGATCATATGAGATTGTCAAGGATGCTTTAAATGCTTTAAGCTGTATGGAACATCGTGGGGGATGTGGTGCAGATAATGACTCTGGTGATGGTTCGGGAGTGATGACTGCAATTCCTTGGGATCTATTTGACAATTGGGCAGACAAGCAAGGGATTGCTTCCTTTGATAAGTTGCACACTGGCGTTGGAATGGTTTTCCTACCCAAAGATGCAGAACTTACAAATAAGGCCAAGAATGttaTTGTAAATACTTTTCAGCAAGAAGGTCTTGAGGTGCTTGGGTGGAGGCCAGTCCCTGTAAATACTTCTGTTGTAGGTTATTATGCAAAGGAGGCCATGCCCAATATACAGCAGGTATTTGTCAAGATTGCGaaggaagaaaatattgaaGACATTGAACGAGAACTGTACATTTGTCGGAAACTGATTGAAAAAGAAGTAAGCTCGGAAAGTTGGGGAAATGAgctttatttttgttctttatcCAATCGAACAATAGTTTACAAGGGGATGCTTCGCTCAGAAGTTTTGGGGTTATTTTATTCTGACCTTCAAAATGATCTTTATAAATCATCCTTTGCCATTTATCATCGAAGGTATAGCACAAATACTAGTCCTAGATGGCCTCTTGCACAGCCGATGAGACTTCTTGGTCATAATGGAGAGATCAACACCATACAGGGAAACTTGAATTGGATGCAATCACGAGAGCCTTCATTGAAGTCACCTGTATGGAGAGGTCGTGAAAATGAAATTCGTCCATTTGGAAATCCAAAAGGATCAGACTCAGCAAATCTTGACAGTGCTGCAGAATTATTAATAAGAAGTGGTCGAAGCCCTGAGGAGTCCATGATGATTCTTGTTCCAGAGGCTTACAAAAATCATCCAACACTGACAATCAAATACCCTGAGGCGATTGACTTCTATGACTACTACAAGGGCCAGATGGAAGCTTGGGATGGACCCGCCTTGCTTTTATTCAGTGATGGAAAAACTGTTGGTGCATGCCTTGATCGTAATGGACTTCGACCTGCTAGGTATTGGCGAACATCAGACAACATGGTCTATGTTGCTTCTGAgGTTGGTGTTGTACCAGTGGACGAGTCAAAGGTTATCTTGAAAGGACGATTAGGTCCAGGCATGATGATAACGGTTGATTTACTTGGTGGCAAGGTCTATGAGAATATGGAGGTTAAAAAACGAGTAGCCTTGTCAAACCCATATGGGAACTGGATCAAGGAAAATCAGCGGTCTTTGAAGTCTGAGAATTTCCTTTCATCCTCTGTGATGGAGAATGATGCAGTATTAAGACACCAACAGGCATTTGGGTACTCAAGTGAAGATGTCCAGATGGTGATTGAGAGTATGGCTTCTCAAGGAAAGGAACCTACATTTTGTATGGGAGATGATATTCCATTGGCAGCGTTATCTCAGAAACCTCACATGCTTTTTGATTACTTTAAGCAACGGTTTGCACAGGTTACAAATCCGGCAATTGATCCGCTTCGAGAAGGGCTAGTTATGTCTCTTGAAGTAAATATAGGGAAGAGAAGGAACATATTGGAAATAGGACCAGAGAATGCTTCACAGGTTATACTATCTAGTCCGGTATTGAATGAAGGGGAACTTGAATCATTGCTAAAAGACTCCCAGTTAAAACCACAAGTGTTGCACACATTTTTTGATATAACTAAGGGGATTGATGGTTCCTTGGAGAAAGCATTAAATAAGCTTTGCGACGCTGCAGATGAAGCTGTTAGAAATGGTTCCCAACTGCTTATTCTTTCGGACCGTTCAGAAGCACTGGAACCAACTCATCCTGCAATTCCAATACTTCTTGCTGTTGGTACTGTTCATCAGCATCTAATCCAGAATGGCCTTCGGATGTCAGCTTCAATCATAGCGGATACTTCTCAGTGCTTTAGCACTCATCAATTTGCCTGTTTAATAGGATATGGTGCAAGTGCTGTGTGTCCATACTTAGCACTGGAGACATGTCGTCAATGGCGTTTGAGTAATAAAACGGTAAATCTTATGAAGAATGGAAAGATGCCTACTGTATCAATTGAACAGGCGCAGAAAAACTACTGCAAGGCTGTAAAAGCAGGTCTTCTAAAAATTCTTTCCAAAATGGGCATTTCATTGCTTTCAAGTTACTGTGGTGCACAGATATTTGAAATCTATGGATTGGGAAAGGAAGTTGTGGATGTTGCATTCACTGGAAGTGTATCGAAAATTGGTGGATTAACTTTTGATGAGCTAGCTAGAGAGACTTTGTCTTTCTGGGTGAAGGCATTCTCTGAAGATACAGCTAAAAGATTGGAAAATTTTGGATTTATAGTGTTCAGACCAGGAGgCGAGTATCATGCAAATAATCCAGAGATGTCAAAGTTGCTCCACAAAGCTGTTCGTCAGAAAAGCCAAAATGCCTTTTCAGTTTATCAACAATATTTGGCTAATCGACCTGTGAATGTTCTCCGTGATCTTCTTGAGTTCAAAAGTGATCGTGCCCCCATTCCTGTGGGGAAGGTTGAACCTGCTTTATCTATTGTGAAACGGTTTTGCACCGGGGGGATGTCTCTTGGAGCTATATCTAGGGAAACTCATGAAGCAATTGCAATTGCGATGAACAGAATAGGTGGAAAATCAAATTCAGGGGAAGGTGGTGAGGATCCCATTCGCTGGAAACCACTTACTGATGTTGTTGATGGTTACTCTCCAACTCTTCCACATCTTAAAGGTCTTCAAAATGGGGATACTGCTACTAGTGCTATCAAACAGGTCGCTTCAGGAAGGTTTGGTGTCACTCCAACGTTCTTAGCAAATGCTGATCAATTAGAAATCAAAATTGCACAAGGTGCAAAGCCTGGTGAAGGTGGACAATTGCCTGGGAAAAAAGTTAGCATGTATATTGCAAGGCTGAGAAATTCTAAACCAGGGGTTCCTCTTATATCTCCACCTCCTCATCATGACATTTACTCTATTGAAGATCTTGCGCAATTGATCTTTGATCTTCACCAGGTGAACCCTAAGGCCAAGGTATCTGTAAAACTGGTGGCTGAAGCTGGAATTGGCACTGTTGCATCTGGGGTTGCAAAGGGCAATGCTGACATTATACAGATTTCAGGACATGATGGGGGAACAGGAGCAAGCCCTATAAGTTCCATCAAACATGCAGGAGGTCCTTGGGAACTTGGACTTACGGAATCTCACCAGACACTCGTTGCGAATGGACTCAGAGAAAGGGTTATTCTCAGAGTTGATGGTGGATTTAGAAGTGGAGTTGATGTCATGATGGCAGCAATAATGGGTGCTGATGAATATGGGTTTGGTTCAGTGGCAATGATTGCAACTGGATGTGTTATGGCTCGCATTTGCCACACCAATAACTGTCCAGTTGGTGTTGCCAGTCAGAGGGAAGAGTTGCGTGCACGGTTTCCTGGTGTCCCTGGTGATCTTGTAAACCTCTTCTTGTATGTAGCTGAAGAGGTAAGAGGCACTTTGGCGCAGCTGGGGTATGAGAAGTTAGATGATATAATTGGCCGAACAGAATTGTTGAGACCAAGAGACATATCTCTTGTGAAAACTCAGCATCTAGATCTGAGTTATATCCTCTCTAATGTCGGGTTACCTAAATGGAGCAGTACAGAAATCAGGAATCAGGAGCCACATACCAATGGTCCTGTTCTGGATGATGTTTTGCTAGCAGACCCAGAGATCGCAGATGccattgaaaatgaaaaagctGTTAGTAAGACCATAAAGATATACAATGTTGATCGTTCTGCATGTGGGCGTATTGCTGGTGTTATTGCAAAGAAATATGGTGACACTGGTTTTGCTGGACAGTTGAATATAACATTTACAGGAAGTGCTGGGCAGTCATTTGGGTGCTTTTTGACACCAGGAATGAATATTCGCCTTGTAGGAGAGGCTAATGATTATGTTGGGAAGGGCATTGCTGGTGGTGAATTGGTTGTCACTCCAGTTGACAAGACAGGGTTTCAACCTGAGGATGCAGCTATTGTGGGGAACACGTGCTTGTATGGGGCAACAGGTGGACAGGTCTTTGTTAGAGGGAAAGCTGGGGAAAGGTTTGCTGTCAGAAACTCACTTGCTGAAGCTGTAGTTGAAGGCACAGGAGATCATTGTCTTGAGTACATGACTGGTGGCTGTGTGGTTATCCTGGGAAAAGTGGGCAGGAATGTAGCTGCTGGAATGACAGGAGGGTTGGCTTACATTTTAGATGAGGATGATACTCTCATTCCCAAGATAAACAGAGAAATTGTTAAAATTCAACGAGTAACAGCACCTGTAGGGCAGATTCAACTGAAGAAACTAATTGAAGCCCATGTTGAAAAAACGGGTAGCAACAAAGGTGATGCAATTCTGAAGGACTGGGACAAGTATTTATCACTATTTTGGCAATTGGTTCCACCTAGCGAAGAAGATACCCCCGAAGCTAATGCCAAGTATGACATAACTGCAACGGAGCAGGTCACTTTCCAGTCTGCTTAG 4851 0.423 MALHTVSSVSQVLRLSDTFTSIGNRHLLVDFAPFRRKSSKRYNRRFTPFISPVNLRRNSVKAILQLDNHLNPAPPPSSSSSDLKPQVANLEDILSERGACGVGFIANLENKGSYEIVKDALNALSCMEHRGGCGADNDSGDGSGVMTAIPWDLFDNWADKQGIASFDKLHTGVGMVFLPKDAELTNKAKNVIVNTFQQEGLEVLGWRPVPVNTSVVGYYAKEAMPNIQQVFVKIAKEENIEDIERELYICRKLIEKEVSSESWGNELYFCSLSNRTIVYKGMLRSEVLGLFYSDLQNDLYKSSFAIYHRRYSTNTSPRWPLAQPMRLLGHNGEINTIQGNLNWMQSREPSLKSPVWRGRENEIRPFGNPKGSDSANLDSAAELLIRSGRSPEESMMILVPEAYKNHPTLTIKYPEAIDFYDYYKGQMEAWDGPALLLFSDGKTVGACLDRNGLRPARYWRTSDNMVYVASEVGVVPVDESKVILKGRLGPGMMITVDLLGGKVYENMEVKKRVALSNPYGNWIKENQRSLKSENFLSSSVMENDAVLRHQQAFGYSSEDVQMVIESMASQGKEPTFCMGDDIPLAALSQKPHMLFDYFKQRFAQVTNPAIDPLREGLVMSLEVNIGKRRNILEIGPENASQVILSSPVLNEGELESLLKDSQLKPQVLHTFFDITKGIDGSLEKALNKLCDAADEAVRNGSQLLILSDRSEALEPTHPAIPILLAVGTVHQHLIQNGLRMSASIIADTSQCFSTHQFACLIGYGASAVCPYLALETCRQWRLSNKTVNLMKNGKMPTVSIEQAQKNYCKAVKAGLLKILSKMGISLLSSYCGAQIFEIYGLGKEVVDVAFTGSVSKIGGLTFDELARETLSFWVKAFSEDTAKRLENFGFIVFRPGGEYHANNPEMSKLLHKAVRQKSQNAFSVYQQYLANRPVNVLRDLLEFKSDRAPIPVGKVEPALSIVKRFCTGGMSLGAISRETHEAIAIAMNRIGGKSNSGEGGEDPIRWKPLTDVVDGYSPTLPHLKGLQNGDTATSAIKQVASGRFGVTPTFLANADQLEIKIAQGAKPGEGGQLPGKKVSMYIARLRNSKPGVPLISPPPHHDIYSIEDLAQLIFDLHQVNPKAKVSVKLVAEAGIGTVASGVAKGNADIIQISGHDGGTGASPISSIKHAGGPWELGLTESHQTLVANGLRERVILRVDGGFRSGVDVMMAAIMGADEYGFGSVAMIATGCVMARICHTNNCPVGVASQREELRARFPGVPGDLVNLFLYVAEEVRGTLAQLGYEKLDDIIGRTELLRPRDISLVKTQHLDLSYILSNVGLPKWSSTEIRNQEPHTNGPVLDDVLLADPEIADAIENEKAVSKTIKIYNVDRSACGRIAGVIAKKYGDTGFAGQLNITFTGSAGQSFGCFLTPGMNIRLVGEANDYVGKGIAGGELVVTPVDKTGFQPEDAAIVGNTCLYGATGGQVFVRGKAGERFAVRNSLAEAVVEGTGDHCLEYMTGGCVVILGKVGRNVAAGMTGGLAYILDEDDTLIPKINREIVKIQRVTAPVGQIQLKKLIEAHVEKTGSNKGDAILKDWDKYLSLFWQLVPPSEEDTPEANAKYDITATEQVTFQSA 1616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03252 1616 PANTHER FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 1, CHLOROPLASTIC/MITOCHONDRIAL 70 1615 - -
Tsu07g03252 1616 CDD GltS 100 517 - -
Tsu07g03252 1616 Pfam GXGXG motif 1366 1548 IPR002489 GO:0016491
Tsu07g03252 1616 PANTHER FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE 70 1615 - -
Tsu07g03252 1616 Gene3D Aldolase class I 574 1300 IPR013785 -
Tsu07g03252 1616 Pfam Conserved region in glutamate synthase 900 1284 IPR002932 GO:0006537|GO:0015930|GO:0016638
Tsu07g03252 1616 Gene3D Aldolase class I 526 892 IPR013785 -
Tsu07g03252 1616 Gene3D - 1322 1597 IPR036485 GO:0016491
Tsu07g03252 1616 Pfam Glutamine amidotransferases class-II 100 522 IPR017932 -
Tsu07g03252 1616 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 100 526 IPR029055 -
Tsu07g03252 1616 CDD gltB_C 1341 1591 IPR002489 GO:0016491
Tsu07g03252 1616 SUPERFAMILY Alpha subunit of glutamate synthase, C-terminal domain 1334 1597 IPR036485 GO:0016491
Tsu07g03252 1616 Pfam Glutamate synthase central domain 549 841 IPR006982 GO:0006807|GO:0015930
Tsu07g03252 1616 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 100 636 IPR029055 -
Tsu07g03252 1616 CDD GltS_FMN 903 1298 IPR002932 GO:0006537|GO:0015930|GO:0016638
Tsu07g03252 1616 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 100 499 IPR017932 -
Tsu07g03252 1616 SUPERFAMILY FMN-linked oxidoreductases 544 1322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03252 Tsu-Chr7 38829759 38853323 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03252 K00284 - gmx:548016 2976.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03252 07 38829759 38853323 Tsu07g03252 07 38829759 38853323 ECH