Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03247 ATGGACACCATTAGCACAAGTAGCACTAATTCAATCATTAGTTCTCTTCAACAAACACCAACAAAAATAACCAAATCcaagaagaaaaagaacaaacCCATCAAGGTAGTTTATATATCAAACCCTATGAAGGTTAAGACCAGTGCCTCTGAATTTAGGGCACTGGTCCAAGAACTCACTGGTCAGTATGCTGAATCGCCGCCGGATCCTTCTAGGTTTCAGGAGTTCAGCGGCGATGATAGCAGTGCTGACGGTGGATGCAGTGAGAATATAATTGATTGTGATAAAAATGATCATACGGTCGTGGTTGTTCCTCCGCTTGTGGATCCTGATGATGATAAAGTGAAACCTAGTGAGAGTTTTGAGGGTTTTGATGAAGATGTACTTTTGAATATGCCTCAGATGGTGGAGAACATTTGGGATCTGCTTCCAACAAGTGCATTCTATGAATCTTTTCAACTTGATAGCTATTGA 474 0.3945 MDTISTSSTNSIISSLQQTPTKITKSKKKKNKPIKVVYISNPMKVKTSASEFRALVQELTGQYAESPPDPSRFQEFSGDDSSADGGCSENIIDCDKNDHTVVVVPPLVDPDDDKVKPSESFEGFDEDVLLNMPQMVENIWDLLPTSAFYESFQLDSY 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03247 157 PANTHER SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC 15 151 IPR039335 GO:0051091
Tsu07g03247 157 PANTHER SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC 15 151 - -
Tsu07g03247 157 MobiDBLite consensus disorder prediction 1 22 - -
Tsu07g03247 157 MobiDBLite consensus disorder prediction 1 31 - -
Tsu07g03247 157 MobiDBLite consensus disorder prediction 61 88 - -
Tsu07g03247 157 Pfam VQ motif 39 64 IPR008889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03247 Tsu-Chr7 38784872 38786028 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03247 - - mtr:MTR_7g089860 183.341