Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03239 ATGATCCTTTCAAAATCATTTACAAATAAACCAATCTCATCAAATGGGACAAAACTAGTTTTTTCAAATGTGTTTTGTGAAAAGCTTTTAAGTTTTCTAGCTTCTAGGATCAAAACAAGAACtagtttttttcaattttcttttggcATGCAATTATCAAACAAGAGTTTAGTTTCAAAATTTGAGCATGGAGAAGAAGAGGTAGAGAAAGTTTCTCTATTGGATTTGCATGATTTGCCATTAGATTGTATCCTTGAAAAACTTTCACCAAGTGAATTATGCAATGTAGCAAAAGTGTGTAAATCTCTTAGAAAAAAATGTAGAAGTGATTATTTATGGGAGAAACATatgaagatgaaatggagtaaaGTTTTTGGTGATGCTGCTTATAGAGAATGGAAATGTTATGTAGCTTCAAGAAACATTGACAAGAGttcaaatcaacacaaaaatcacaaaacaatacttgattttcttcatggttttcttcctttcttttggattaaatcaaaatcagaaaaagCTATAATTTCAAGGCCAGATGATTCAATTGCTGCTCTTTATCTTTCTCTTGAGAATGGAAATTTTTGGTTCCCTGCTCAAGTTTATAACCGtgagaatGGTCATGCTGGATTCATGCTCTCATGTTATGATGCTCAACTTTGCTATGACTATAGAACAGATACTTTTCAAGCAAGGTATTCACCTAATGGGAGATGGACAATTGAGGAAAACATAAAATGGGAGAGGCTAAGAGTGCCACCTATTGACTCTTCTTCACATGTTCTTCATATCTCTGATTGTTTAGATGATTTAAGGCCAGGAGATCATGTTGAAATCCAATGGAGAAGAAACAAGGAGTTCCCTTATGGTTGGTGGTATAGTGTCATTGGTCATTTAGAAACATGTCAAGAGCAAGGGAACCATTGCCAATGTCACAATAAAGATACAGTGATGTTGGAGTTCACACAATATACAGTTGGTTCAAGATGGAGACAAACAATGATAAACAGAAAGAGTCATAGAGAACAAGGAAATGAAATAGAAGGTTTCTATGGAGGAATTAGAAAGTTGCATAGCAAAGAGGAAATTACAAGGTGGAAGAAACTTTGGCCAACAAAAATTGTGGAATAG 1134 0.306 MILSKSFTNKPISSNGTKLVFSNVFCEKLLSFLASRIKTRTSFFQFSFGMQLSNKSLVSKFEHGEEEVEKVSLLDLHDLPLDCILEKLSPSELCNVAKVCKSLRKKCRSDYLWEKHMKMKWSKVFGDAAYREWKCYVASRNIDKSSNQHKNHKTILDFLHGFLPFFWIKSKSEKAIISRPDDSIAALYLSLENGNFWFPAQVYNRENGHAGFMLSCYDAQLCYDYRTDTFQARYSPNGRWTIEENIKWERLRVPPIDSSSHVLHISDCLDDLRPGDHVEIQWRRNKEFPYGWWYSVIGHLETCQEQGNHCQCHNKDTVMLEFTQYTVGSRWRQTMINRKSHREQGNEIEGFYGGIRKLHSKEEITRWKKLWPTKIVE 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03239 377 ProSiteProfiles F-box domain profile. 70 116 IPR001810 GO:0005515
Tsu07g03239 377 Pfam F-box domain 75 115 IPR001810 GO:0005515
Tsu07g03239 377 Gene3D - 65 149 - -
Tsu07g03239 377 PANTHER F-BOX-LIKE PROTEIN 2 377 - -
Tsu07g03239 377 SUPERFAMILY F-box domain 76 331 IPR036047 GO:0005515
Tsu07g03239 377 SMART fbox_2 79 116 IPR001810 GO:0005515
Tsu07g03239 377 PANTHER ESTS AU081301(E20138) 2 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03239 Tsu-Chr7 38557633 38561396 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03239 - - gmx:100778469 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03239 07 38557633 38561396 Tsu07g03239 07 38557633 38561396 ECH