Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03238 ATGATGAACGGAGGCCCATCTGGTTTCACAAATGCTCCTGTTACAAGGGCTTTCGTCATCGCCTCAGCGCTTTTCTCAATTTTCTTTGGGATCCAAGGTCGTTTCAATACTCTAGGATTATCTTATCAGGATATTTTTGGAAAGCTTCGCATATGGAAATTGATTATGTTCATATTTTCCTTCACATCAACACCGGAATTGATGTTTGGACTATATCTGCTATACTACTTCAGGGTATTTGAGAGACAAATTGGTTCCAACAAATGCTCAGTATTCATTGTGTTCTCCATATTAACTTCACTTTTGTTTGAAGTATTTGCTGTTGCACTTTTAAAAGATACTTCAGAAACCCTAGTCACTCCTGGACCTTATGGCCTTATATTTGCTTCGTTTGTACCCTTTTTCTTTGACATTCCCGTTTCAACACGGTTCCGTATGTTTGGCTTCAACTTCTCTGATAAGTCAATCATATATGTAGCTGGACTTCAGCTTCTACTGTCACATTGGAAAAAGTCCGTCTTACCGGGGATATGTGGCATCCTTGCTGGTTCCTTATACCGTTTGAATGTCTTTTATATCCGCAAAGCAAAGTTCCCGGAGTTTATTTCATCATTCTTTTCACGAATTTCCTTGCCATCCATTGGGGGTCCACGCACAACACCAACAAGGAATGTTATGGGGAATGTACCATCCTTCCCAGGTCGCCAAATGGAGAGAAACTATCCAGCTCCAATGCATTCTGCAGTAGAACCGTCGGAGGACTCAATCGCGACCCTTGTTTCAATGGGATTTGACAGGAATTCTGCTCGACAAGCCCTAGTGCAGGCCAGAAATGACGTGAATGTGGCGACAAACATCCTACTGGAGGCACAGGCCCACTAA 882 0.4252 MMNGGPSGFTNAPVTRAFVIASALFSIFFGIQGRFNTLGLSYQDIFGKLRIWKLIMFIFSFTSTPELMFGLYLLYYFRVFERQIGSNKCSVFIVFSILTSLLFEVFAVALLKDTSETLVTPGPYGLIFASFVPFFFDIPVSTRFRMFGFNFSDKSIIYVAGLQLLLSHWKKSVLPGICGILAGSLYRLNVFYIRKAKFPEFISSFFSRISLPSIGGPRTTPTRNVMGNVPSFPGRQMERNYPAPMHSAVEPSEDSIATLVSMGFDRNSARQALVQARNDVNVATNILLEAQAH 293
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03238 293 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 250 290 IPR015940 -
Tsu07g03238 293 Gene3D - 234 292 - -
Tsu07g03238 293 SMART uba_6 252 289 IPR015940 -
Tsu07g03238 293 Pfam UBA/TS-N domain 252 287 IPR015940 -
Tsu07g03238 293 Pfam Rhomboid family 50 190 IPR022764 GO:0004252|GO:0016021
Tsu07g03238 293 SUPERFAMILY UBA-like 246 290 IPR009060 GO:0005515
Tsu07g03238 293 SUPERFAMILY Rhomboid-like 10 195 IPR035952 -
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03238 K25216 - gmx:100805217 499.59
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03238 07 38547792 38554424 Tsu07g03238 07 38547792 38554424 ECH