Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03230 ATGGATCCAACTCACACTCTTGTTCAATCTCTTCATTTTCGGGAAATTACAAACACAAGAGAACTTAGGAATGCATTTGACAAATATGATAAAAACGTTTTGTCTCGATGCCTGAACTGGACTTCGAGGGAAAATGATAATCATCATGCTGCCAGCTATGTGGTAAACCGTCATTTTAGAGCTGATCACAATGATAGATGCAGAAAGGAGTTCTCAAGTAAGCTTCTTAAAAATATTCCAGACTTTGTTAAGATAGTGGAGGTTGGTGCAAGGGATGGATTGCAAAATGAGAAGGTTATTGTTCCCACTGATGTGAAAACTAAATTGATAAAACTGCTAGTTTCTTCTGGGTTGTCTGTTGTTGAGGCGACGAGTTTTGTCTCACCAAAATGGGTGCCACAGTTGGCAGATGCAAAGGATGTATTGGCAGCAATCCGAGATGTTGAAGGTGCTAGCTTTCCTGTCTTAACTCCAAATCTCAAAGGTTTTGAGGCAGCTGTTGCTGCTGGTGCTAAGGAAGTGGCTGTTTTTCCTGCTGCTTCTGAATCATTCTCTAAAGCCAATCTCAATCGTGGCATTGAGGATAACCTTGCTCGTTGCCGTGACATTGCTTCAGCTTCTAGAAGCCTTTCGATCCCAGTTCGTGGATACATATCATGTGTTGTGGGATGTCCTCTGGAAGGAAAAATTGCTCCAGCAAAAGTAGCATACGTTGCAAAATCACTTTATGAGATGGGGATCTCTGAGATTTCGTTAGGGGATACAATTGGAGTTGGTACACCGGGTACCGTCATTCCTATGCTTGAAGCTGTTCTTGATGTCGTTCCAGTTGACAAGCTTGCTGTCCACTTTCATGATACTTACGGTCAGGCACTTTCAAATATTCTAATTTCACTACAGGTAAACACCTTttattcttcagatgctgataTGTTATAG 939 0.4089 MDPTHTLVQSLHFREITNTRELRNAFDKYDKNVLSRCLNWTSRENDNHHAASYVVNRHFRADHNDRCRKEFSSKLLKNIPDFVKIVEVGARDGLQNEKVIVPTDVKTKLIKLLVSSGLSVVEATSFVSPKWVPQLADAKDVLAAIRDVEGASFPVLTPNLKGFEAAVAAGAKEVAVFPAASESFSKANLNRGIEDNLARCRDIASASRSLSIPVRGYISCVVGCPLEGKIAPAKVAYVAKSLYEMGISEISLGDTIGVGTPGTVIPMLEAVLDVVPVDKLAVHFHDTYGQALSNILISLQVNTFYSSDADML 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03230 312 Gene3D Aldolase class I 79 305 IPR013785 -
Tsu07g03230 312 Pfam HMGL-like 83 300 IPR000891 GO:0003824
Tsu07g03230 312 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 12 301 IPR043594 GO:0016833
Tsu07g03230 312 SUPERFAMILY Aldolase 78 300 - -
Tsu07g03230 312 CDD DRE_TIM_HMGL 85 307 - -
Tsu07g03230 312 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 12 301 - -
Tsu07g03230 312 ProSiteProfiles Pyruvate carboxyltransferase domain. 83 312 IPR000891 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03230 Tsu-Chr7 38426218 38431607 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03230 K01640 - gmx:100801507 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03230 07 38426218 38431607 Tsu07g03230 07 38426218 38431607 ECH