Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03208 ATGGAGCTGGATATCCAGAAATTTATGAATAACGCTGATCAGCATCATTTTGAATTTCAACATTTCCCTTCCTCTTATCTCCGATTGGCTGCACATCGTGTTGCTCAACACTACGGCTTGCAAACAATGGTTCAGGACAATGGATTAGATGGCCAGAGTAAAATTTTGGTCAGGAAGTTACCCGAAAGCAAGTACCCTGTAGTTCGCTTATCTGAAATACCTGCAAAACAGTTGGACAATGAGAAATCTGAGCTGAAAAAAATCGTCATCCGACCTAGGCCTCATAACACTGGTTTGAATGGAGCTAATGATTCCTCAAAAAAAGGAAATCCATTGAGAAGTGTGGAAGAGAGGAAGGAGGAGTATGATCGGGCACGGGCACGTATCTTTAATGGCTCTACAAGCTTTGATTCAGTTGATACCCCATCCATGGTCCCAATAGATGGGAAAAGTCCTTCAATGAGCAAGGATGAGAATGAAACTAGCAAAATTGCCATGGCCGATCCAGAAAGATGCATCAGTTTCAGGGATAACAGTTATCCTCGAGTTGCCATTATCAGAGATAGGGAAAAGGATCGAAGTGATCCAGATTATGATCGCAGCTATGGAAGGTATGCTAGGAGTTTATCAGCCTCTGCAATTAACTTGGTGCCTTTTAATTTGCCAAACGCTCAACCTTCATTTGCTCAGTATGACACTACTTTCAATCCATTGGGTCAGATGCCACAAACTCAGGCTTCACTTGGATACGGGCTTCCTTCAACCCCAATGATGAGTCCTTTTGTTACCCCAGCTTTGAATCCGACATCCGGTGATGGTGCTTACCTACAGTGGCCAAGTCCTACAATGATGTATGCACATTCATATGACCAATTCAGACATGCTGTTTACCAGGCTCCATTTGGTCAACCATTGAGCTTTGACTATTCACAGAACTATTAG 942 0.4299 MELDIQKFMNNADQHHFEFQHFPSSYLRLAAHRVAQHYGLQTMVQDNGLDGQSKILVRKLPESKYPVVRLSEIPAKQLDNEKSELKKIVIRPRPHNTGLNGANDSSKKGNPLRSVEERKEEYDRARARIFNGSTSFDSVDTPSMVPIDGKSPSMSKDENETSKIAMADPERCISFRDNSYPRVAIIRDREKDRSDPDYDRSYGRYARSLSASAINLVPFNLPNAQPSFAQYDTTFNPLGQMPQTQASLGYGLPSTPMMSPFVTPALNPTSGDGAYLQWPSPTMMYAHSYDQFRHAVYQAPFGQPLSFDYSQNY 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03208 313 SUPERFAMILY R3H domain 1 82 IPR036867 GO:0003676
Tsu07g03208 313 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 1 312 - -
Tsu07g03208 313 MobiDBLite consensus disorder prediction 140 162 - -
Tsu07g03208 313 CDD R3H_encore_like 1 59 - -
Tsu07g03208 313 ProSiteProfiles SUZ domain profile. 64 134 IPR024771 -
Tsu07g03208 313 Pfam SUZ domain 86 133 IPR024771 -
Tsu07g03208 313 Pfam R3H domain 1 48 IPR001374 GO:0003676
Tsu07g03208 313 MobiDBLite consensus disorder prediction 93 120 - -
Tsu07g03208 313 PANTHER OS05G0411600 PROTEIN 1 312 - -
Tsu07g03208 313 Gene3D - 1 93 IPR036867 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03208 Tsu-Chr7 38160376 38163595 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03208 - - gmx:100814835 502.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03208 07 38160376 38163595 Tsu07g03208 07 38160376 38163595 ECH