Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03200 ATGGCAACATCTCCATTAACCTCCCTTCTCCCATTCACAACTTCATCAACTATATCTCATTCAAAGCTCTCATCTTTTCGTGCATTCAGAGTCTCAGCTTCTGTCTCAGTTCCTGAAACTCATTTTCAACACACACCCAGAAGAGAATTCTTAAAGGGTATTGCTCTTTCACTCCCACTTATTGCTCTCACTGAACCACCACAGTCACAAGCTAGAGACGTTGCAGTTGGCTCTTTCCTCCCTCCTTCATCATCAGACCCTTCTTTTGTTCTCTTCAAAGCTTCTCCTAAAGATACTCCTGCCCTTCGTGCAGGAAATGTCCAGCCATACCAGTTTATCATTCCTCCAACATGGAAACAGCTTCGTATAGCTAACATACTATCAGGAAATTACTGTCAACCAAAATGTGCAGAGCCATGGGTGGAGgtgaaatttgaagatgaaaaacAAGGAAAAATTCAGGTAGTTGCTTCACCTTTGATACGCCTAACCAACAAACCAAATGCAACAATTGAGGACATCGGTAGCCCAGAAAAGGTTATTGCTTCTCTCGGCCCATTTGTAACCGGAAACACTTTAGATCCTGATGAACTCATCGAGACTTCAGTTGAAAAGATTGATGATCTGACGTACTACAAATATGTGCTTGAAACTCCTTATGCTCTTACTGGTACACACAATCTTGCAAAAGCAACAGCAAAGGGAAACACCGTTTTTTCTGTTAAAGTGTTGTTAAGCTTTACAACGATTCAAGATCAAAACCTTACCTCATTAGGTCTTGATGACTTGATCTAA 795 0.4038 MATSPLTSLLPFTTSSTISHSKLSSFRAFRVSASVSVPETHFQHTPRREFLKGIALSLPLIALTEPPQSQARDVAVGSFLPPSSSDPSFVLFKASPKDTPALRAGNVQPYQFIIPPTWKQLRIANILSGNYCQPKCAEPWVEVKFEDEKQGKIQVVASPLIRLTNKPNATIEDIGSPEKVIASLGPFVTGNTLDPDELIETSVEKIDDLTYYKYVLETPYALTGTHNLAKATAKGNTVFSVKVLLSFTTIQDQNLTSLGLDDLI 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03200 264 Pfam PsbP 109 243 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Tsu07g03200 264 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 87 253 - -
Tsu07g03200 264 PANTHER - 23 240 - -
Tsu07g03200 264 PANTHER PSBP DOMAIN-CONTAINING PROTEIN 6, CHLOROPLASTIC 23 240 - -
Tsu07g03200 264 SUPERFAMILY Mog1p/PsbP-like 105 243 IPR016123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03200 Tsu-Chr7 38036677 38039658 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03200 - - cam:101504678 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03200 07 38036677 38039658 Tsu07g03200 07 38036677 38039658 ECH