Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03186 ATGAGATTGTTCGAAATGGCCGTTGCCATTGATCAACAACACCATGGATTTAAGCCATTTAGTCGATCCCAGAGATGCAAACTCCAATCCTTTGGTCACCTTGATTACAACAACATTCTTGAACTCAACCAAACTACTATTCTAGCATTTCAAGCCGATAATATTCACCGCAGTTTCTCCACTCCATGTCTACCCTTAACCGGGGTAGAAGATCTCAATCCTCCTCATCCTAGGATCGAGATCGTTCGTGGAAGTGGAGCTCCGGTACATGCTCTAGTCGTCGAGGTTGCAGTTGCTATGGCCTCAGGTATTCAACCTATTCCACTCCCTAGTGGACTTGGTGGTGCCTATGTTTTCCATAACCAAAATGGTAACAACATTGCTGTAGCAAAGCCAGTCGACGAAGAACCTTTCGCCTTGAATAATCCGAAAGGCTTACAAAGTACTAATCATCAAATGCTAGGCCAACCTAGCTTAAAGCGTCCCATTCGAATCGGCGAAACTGGTATAAGAGAATTAGCTGCTTATCTACTTGATCATGGAGGATTTTCTGGTGTGCCACCAACTGCTTTAGTTAAACTCTGTCATGCTACATTCTCCGATTCTTCTGCCACTGTTAAACTCGCTTCACTCCAACGCTTTGTTGGTCATGGTTTCGATGCAGGAGAGTTAGGCCCTTCTCTCTTTTCAGTTGATTCTGTTCATCAAATTGGTATTCTAGACATTAGGCTTATGAATCTTGATAGACATGCAGGGAATATGCTTGTTATGAAACATGATCACAATAGTTTTGTTAATGACAATGCTGTCGCCGATCTTGTTCCGATTGATCACGGCTTTTGCTTACCTGAGTGGCTAGATGATCCATATTTTGAGTGGCTGCACTGGCCACAAGCCTCAATTCCTTTCTCTGAATCAGAACTTGAGTATATTTCAAAACTCGATCCTTTTAAAGATGCTGATATTCTAAGATCCGAGGTACCTTCATTGAGAGAATCATCTATTCGCGTTCTTATCGTTTGCACCGTTTTCTTGAAAAAAGCTGTTGTTGCTGGCCTTTGTCTTGCTGATATAGGCCAGATGATGACAAGGGAATTTTGCCGTGGCGAGGAATCGTCAAGCGAATTggaaaatatttgtttgaaaGTGAAAACTAGTATCAAGAATGAGAATggaaaagaagaagatgaaaaagagaCTAATTGTGGAATTGGTGGCATTTCTTTTGGTGACATGAACAAAGGTGAATGGGAATTGTTTTTGGAGAATTTTGATAAGTTTGTGATTGGAGTTTTTGAGGATAAGAAGTGTAAGAATTGA 1320 0.403 MRLFEMAVAIDQQHHGFKPFSRSQRCKLQSFGHLDYNNILELNQTTILAFQADNIHRSFSTPCLPLTGVEDLNPPHPRIEIVRGSGAPVHALVVEVAVAMASGIQPIPLPSGLGGAYVFHNQNGNNIAVAKPVDEEPFALNNPKGLQSTNHQMLGQPSLKRPIRIGETGIRELAAYLLDHGGFSGVPPTALVKLCHATFSDSSATVKLASLQRFVGHGFDAGELGPSLFSVDSVHQIGILDIRLMNLDRHAGNMLVMKHDHNSFVNDNAVADLVPIDHGFCLPEWLDDPYFEWLHWPQASIPFSESELEYISKLDPFKDADILRSEVPSLRESSIRVLIVCTVFLKKAVVAGLCLADIGQMMTREFCRGEESSSELENICLKVKTSIKNENGKEEDEKETNCGIGGISFGDMNKGEWELFLENFDKFVIGVFEDKKCKN 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03186 439 Pfam Phosphatidylinositol 3- and 4-kinase 113 357 IPR000403 -
Tsu07g03186 439 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 8 6 401 - -
Tsu07g03186 439 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 8 403 438 - -
Tsu07g03186 439 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 103 395 IPR000403 -
Tsu07g03186 439 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 403 438 IPR044571 -
Tsu07g03186 439 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 6 401 IPR044571 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03186 Tsu-Chr7 37882080 37884936 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03186 5 411 Acyl Lipid Metabolism Gene Families AT2G40850 57.477 8.48e-160 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03186 - - gmx:100809677 625.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03186 07 37882080 37884936 Tsu07g03186 07 37882080 37884936 ECH