Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03183 ATGGTGAATCTGGGATTGATTTCTGGAAATAAGTCGGCGAATTCAGTGAAGATAAGCTTTCGGTTACCGTATCTTACTCAATGGGGTCAGAGTTTGCTGGTGTGTGGCTCTGTACCAGTGCTTGGATCATGGAATGTGAAGAAGGGTGTGTTGCTCACTCCCTTTCATGAAGGGACTGAGCTTGTATGGAGTGGAAGTATCACAGTGCCAAAAGGGTTCGAATGTGAGTACACTTATTATGTTGTGGATGATAAAAAGAATATTGTGAGATGGGAGATGGGGAAGAAGCACGAACTGAGGCTCCCCGAAAGTGTTCAGAGTGGCCAGGAGATTGAGTTCCGTGATCTTTGGCAGACCGGCTCAGATGCTCTCCCTTTCAGAAGTGCTTTCAGAGATGTCATTTTTCGGCAAAGCTGGGATTCGAGCATCAAGACAACTACAGGAGTTAACCACATCAATCTTGAACCAGAAGCGGAATCCATTCTCGTCCAATTCAAAGTTTTCTGCCCCAATATTGAGAAAGACACATCAATATACTTGATAGGTAGCAATACAAAGTTGGGGCAGTGGAAAGTTGAAAGTGGACTAAAACTCAGCTATGCTGGTGAATATGTCTGGCTAGCTGAATCTGTGATACAAAGGAGTGATTTTCCAATAAGATATAGATATTGTAAATATGACAGGTCTGGAAATGCTTCTATTGAAAATGGTCCAAATCGAGAAGTCTCCATTAATGCCTCGAGAAGAGAGgcaaaatatatttatctttcAGATGGCATGATACGTGAAACGCCCTGGCGTGGTGCTGGCGTAGCTATTCCTATGTTCTCTATTAGGTCAGAATCTGATCTAGGAGTTGGAGAATTTCTTGACCTTAAATTACTAGTTGACTGGGCTGTAGCATCCGGTTTCCATTTAGTTCAACTTTTACCAATCAACGATACATCTGTGCATCAGATGTGGTGGGATTCTTATCCATACAGCTCACTTTCAGTATTTGCGCTGCATCCGTTGTACCTGAGAGTACAGGCACTTTCTAAGAACATACCAGAGGAGATCAAGCAAGAGATTGAGAGTGCAAAACAACAATTAGATGGGAAGGATGTTGATTATGAAGCTACAATGGCGACTAAACTCTCGATTGCTAAGAAAGTCTTCAATCAAGAGAAAGACTTGATACTTAATTCGAGTTCCTTTCAGGAGTTCTTTTCAGAGAATGAGGGTTGGTTGAAACCCTATGCTGCCTTCTGTTTCCTGCGAGACTTCTTTGAAACATCAGAACGGAGTCAATGGGGCCGTTTTGCTCATTATTCAGAAGATAAGTTAGAGAAACTTGTATCAAAGGAAAGCTTGCATTACGAGATAATTTGCTTCCACTACTATGTTCAATACCATCTACATTTACAATTGTCTGAAGCTTCAGAATATGCACGAAAGAAGGGCGTGATCCTAAAGGGAGATCTTCCCATTGGAGTTGACAGAAATAGTGTGGATACTTGGGTGTATCCAAATTTGTTCCGAATGAACACTTCTACCGGGGCTCCTCctgattattttgataaaaatggtCAGAATTGGGGCTTTCCTACTTATAACTGGGAAGAAATGTCAAAAGACAACTATGCTTGGTGGCGAGCACGATTGACACAGATGGGAAAATATTTCACAGCTTATAGGATTGATCACATATTGGGATTCTTCCGAATTTGGGAACTTCCAGATCATGCTATGACAGGTCTAGTCGGAAAGTTCCGACCATCTATTCCTCTAAGTCAGGAAGAACTTGAAAGAGAAGGAATATGGGACTTCAATCGCCTGAGCCGTCCATACATTAGGCAGGAAATTTTACAGGAAAAATTTGGACCTGCTTGGACATTTGTTGCAACAACTTTTTTGAACGAATATGACAAGAGCTGCTATGAGTTCAAGGAGGATAGCAACACAGAGAAAAAAATTGCTTCCAAACTGAAAACTTCTGCTGAAAGTTCTCTGTTGTTGGAGAGTGAAGACAAAACCCGGCGCAGTCTGTTCGATCTTTTACAGAATATAGTTCTAATCCGAGATCCAGAGAATCCAAAACATTTTTATCCTCGTTTCAACCTTGAAGATACCTCAAGTTTCCAGGCTTTGGATGATCATAgCAAGGATGTTCTCAAAAGATTGTACTACGATTACTATTTCCATCGTCAAGAGAATCTTTGGAGGCAAAATGCGCTGAAGACTTTACCTGCACTTCTAAATTCATCAGAGATGCTGGCCTGCGGGGAAGATTTGGGTCTCATTCCATCTTGTGTACATCCTGTTATGCAAGAACTCGGATTAGTTGGGTTGCGTATTCAACGGATGCCCAATGAATCTGATCTGGAATTTGGTATTCCTTCTCAGTACAGCTACATGACGGTATGTGCTCCATCATGTCATGACTGTTCCACCTTGCGTGCTTGgtgggaagaagatgaagacagAAGACAACGATTTTTCAAGAATGTGATGGAGTCTGATGAGTTGCCACCTGATCAATGTGTTCCAGAAATTGCGCATTTTATTATAAGGCAACATATCGAATCCCCATCGATGTGGGCAATTTTCCCTCTTCAGGACTTGTTAGCATTAAAAGAAGAATATACAGCACGGCCAGCAATAGAAGAGACAATCAACGACCCTACAAATCCGAAGCACTATTGGAGATACCGTGCGCACGTGACTCTGGAGTCATTGAATAAAGATAATGAGCTCAAAACCATCATTAAAGATCTCGTACGTTGGGGTGGAAGATCAATTCCTCCAGAAGACTCAGAAGTTGAAGCAAGTCTAATCTCAACATCATCAGCAGCAGATGCCGTTTCAGAGAAGCAACAGTTTGCTGCTATCAGCGAAAAGATCGGTCATCCTTCTGAATCTAATGGAGTTCCATCAAAGGGTCCTTTGGCCGTCCGTTGA 2940 0.4129 MVNLGLISGNKSANSVKISFRLPYLTQWGQSLLVCGSVPVLGSWNVKKGVLLTPFHEGTELVWSGSITVPKGFECEYTYYVVDDKKNIVRWEMGKKHELRLPESVQSGQEIEFRDLWQTGSDALPFRSAFRDVIFRQSWDSSIKTTTGVNHINLEPEAESILVQFKVFCPNIEKDTSIYLIGSNTKLGQWKVESGLKLSYAGEYVWLAESVIQRSDFPIRYRYCKYDRSGNASIENGPNREVSINASRREAKYIYLSDGMIRETPWRGAGVAIPMFSIRSESDLGVGEFLDLKLLVDWAVASGFHLVQLLPINDTSVHQMWWDSYPYSSLSVFALHPLYLRVQALSKNIPEEIKQEIESAKQQLDGKDVDYEATMATKLSIAKKVFNQEKDLILNSSSFQEFFSENEGWLKPYAAFCFLRDFFETSERSQWGRFAHYSEDKLEKLVSKESLHYEIICFHYYVQYHLHLQLSEASEYARKKGVILKGDLPIGVDRNSVDTWVYPNLFRMNTSTGAPPDYFDKNGQNWGFPTYNWEEMSKDNYAWWRARLTQMGKYFTAYRIDHILGFFRIWELPDHAMTGLVGKFRPSIPLSQEELEREGIWDFNRLSRPYIRQEILQEKFGPAWTFVATTFLNEYDKSCYEFKEDSNTEKKIASKLKTSAESSLLLESEDKTRRSLFDLLQNIVLIRDPENPKHFYPRFNLEDTSSFQALDDHSKDVLKRLYYDYYFHRQENLWRQNALKTLPALLNSSEMLACGEDLGLIPSCVHPVMQELGLVGLRIQRMPNESDLEFGIPSQYSYMTVCAPSCHDCSTLRAWWEEDEDRRQRFFKNVMESDELPPDQCVPEIAHFIIRQHIESPSMWAIFPLQDLLALKEEYTARPAIEETINDPTNPKHYWRYRAHVTLESLNKDNELKTIIKDLVRWGGRSIPPEDSEVEASLISTSSAADAVSEKQQFAAISEKIGHPSESNGVPSKGPLAVR 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03183 979 Gene3D Glycosidases 266 596 - -
Tsu07g03183 979 Gene3D Glycosidases 720 925 - -
Tsu07g03183 979 Gene3D Immunoglobulins 8 119 IPR013783 -
Tsu07g03183 979 Gene3D Immunoglobulins 154 256 IPR013783 -
Tsu07g03183 979 SMART CBM_20_2 15 111 IPR002044 GO:2001070
Tsu07g03183 979 SMART CBM_20_2 160 254 IPR002044 GO:2001070
Tsu07g03183 979 SUPERFAMILY Starch-binding domain-like 13 117 IPR013784 GO:0030246
Tsu07g03183 979 MobiDBLite consensus disorder prediction 955 979 - -
Tsu07g03183 979 SUPERFAMILY Starch-binding domain-like 159 248 IPR013784 GO:0030246
Tsu07g03183 979 SUPERFAMILY (Trans)glycosidases 266 919 IPR017853 -
Tsu07g03183 979 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 155 268 IPR002044 GO:2001070
Tsu07g03183 979 CDD CBM20_DPE2_repeat2 163 259 IPR034841 GO:2001070
Tsu07g03183 979 Pfam 4-alpha-glucanotransferase 273 901 IPR003385 GO:0004134|GO:0005975
Tsu07g03183 979 PANTHER - 10 926 - -
Tsu07g03183 979 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 10 119 IPR002044 GO:2001070
Tsu07g03183 979 Pfam Starch binding domain 16 108 IPR002044 GO:2001070
Tsu07g03183 979 Pfam Starch binding domain 161 251 IPR002044 GO:2001070
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03183 1 928 Glycoside Hydrolase AT2G40840 71.966 0.0 1447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03183 K00705 - gmx:100809128 1720.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03183 07 37794836 37804769 Tsu07g03183 07 37794836 37804769 ECH