Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03179 ATGACTGCTCAAACTCAAGAAGAGCTTCTCGCTGCTCATCTCGAACAACAAAAGATCCATCATGACGAGCCTGTAgttgaggatgatgatgacgaGGAGGATGAGGATGACGATGAAGACGATGATGAGGAAGATGACAATGCGGATGGTCTTGATGTTGATTCATCTGGTAGGTCCAAACAGACCAGAAGTGAAAAGAAGAGTCGCAAGGCAATGCTTAAACTTGGAATGAAGTCTGTTACTGGTGTCAGTCGTGTGACAGTCAAGAAGAGCAAGAATATCTTGTTCGTCATCTCAAAACCAGATGTTTTCAAGAGCCCAACTTCCGACACCTACATTATATTTGGAGAAGCTAAGATTGAAGACTTGAGCTCACAGCTACAAACTCAGGCAGCTGAGCAGTTTAAGGCTCCTAATTTGAGCAATGTGGGAGCGAAGCCAGAATCCTCGGGTATTGCTCCAGAAGATGAGGATGTCGACGAGACTGGTGTAGATCCTAAGGATATTGAGTTGGTGGTGACTCAAGCTGGTGTGCCAAGATCAAGAGCTGTTAAAGCTCTCAAAGTTGCCAATGGAGACATTGTTGCTGCCATTATGGAGCTCACTAATTAA 612 0.433 MTAQTQEELLAAHLEQQKIHHDEPVVEDDDDEEDEDDDEDDDEEDDNADGLDVDSSGRSKQTRSEKKSRKAMLKLGMKSVTGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIIFGEAKIEDLSSQLQTQAAEQFKAPNLSNVGAKPESSGIAPEDEDVDETGVDPKDIELVVTQAGVPRSRAVKALKVANGDIVAAIMELTN 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03179 203 MobiDBLite consensus disorder prediction 138 165 - -
Tsu07g03179 203 Gene3D - 164 201 - -
Tsu07g03179 203 MobiDBLite consensus disorder prediction 1 73 - -
Tsu07g03179 203 Pfam NAC domain 65 120 IPR002715 -
Tsu07g03179 203 Pfam HYPK UBA domain 163 202 IPR044034 -
Tsu07g03179 203 PANTHER NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3 203 - -
Tsu07g03179 203 SMART NAC_2 65 121 IPR002715 -
Tsu07g03179 203 MobiDBLite consensus disorder prediction 51 72 - -
Tsu07g03179 203 Gene3D - 71 124 IPR038187 -
Tsu07g03179 203 MobiDBLite consensus disorder prediction 26 50 - -
Tsu07g03179 203 ProSiteProfiles NAC A/B domain profile. 62 127 IPR002715 -
Tsu07g03179 203 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 3 203 IPR016641 GO:0005854
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03179 Tsu-Chr7 37739494 37742020 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03179 K03626 - gmx:100500056 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03179 07 37739494 37742020 Tsu07g03179 07 37739494 37742020 ECH