Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03178 ATGCTTAAACTTGGAATAAAATCTGTTAGTGGTGTCGGTCGTGTGACAGTCAAGAAGAGCAAGAATATCTTGTTCGTCATCTCAAAACTCGATGTTTTCAAGAGCCCAACTTCCGACACCTACATTATATTTGGAGAAGCTAAGATTGAAGACTTGAGCTCACAGCTACAAACTCAGGCAGCTGAGCAGTTTAAGGCTCCTAATTTGTGCAATGTGGGAGCGAAGCCAGAATCCTCGGGTATTGCTCCGGAAGATGAGGATGTAGACGAGACTGGTGTAAATCCCAAGGATATTGAGTTGGTGCCGAGTCAAGCTGGTGTGCCAAGATCAAGAGCTGTTAAAGCTCTCAATGCTGCCAACGGAGACATTGTTGCTGCCATCATGAAGTCAAAATCTAAGTGTATTTTTGCTTTCATTGAGGCCCGGATAGTTAAAGTTCTTGTTTCAAGTCAAGAAAGTAATAAGAACAACACGTCAAGGTAA 483 0.4286 MLKLGIKSVSGVGRVTVKKSKNILFVISKLDVFKSPTSDTYIIFGEAKIEDLSSQLQTQAAEQFKAPNLCNVGAKPESSGIAPEDEDVDETGVNPKDIELVPSQAGVPRSRAVKALNAANGDIVAAIMKSKSKCIFAFIEARIVKVLVSSQESNKNNTSR 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03178 160 ProSiteProfiles NAC A/B domain profile. 1 56 IPR002715 -
Tsu07g03178 160 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 1 129 IPR016641 GO:0005854
Tsu07g03178 160 Gene3D - 93 129 - -
Tsu07g03178 160 Gene3D - 5 57 IPR038187 -
Tsu07g03178 160 PANTHER NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 1 129 - -
Tsu07g03178 160 Pfam NAC domain 1 49 IPR002715 -
Tsu07g03178 160 MobiDBLite consensus disorder prediction 75 94 - -
Tsu07g03178 160 PIRSF NAC_alpha 1 131 IPR016641 GO:0005854
Tsu07g03178 160 Pfam HYPK UBA domain 92 129 IPR044034 -
Tsu07g03178 160 SMART NAC_2 1 50 IPR002715 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03178 Tsu-Chr7 37732252 37736236 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03178 K03626 - gmx:100500056 205.682