Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03131 ATGGCTTTCTCACGTTCCTTTTCtgcttttcttttctctttgatAGTTTGTTTGGTCATTTCTAAATGCCAAGCTAATGCTAATGTTAGTATATCAAAACTAGTGATTAATGCTAGTTCTACAAGGCCTATTCCAAACACATTTTTTGGAGCATTTTTTGAGgaGATTAATCATGCTGGAGCTGGAGGATTATGGGCAGAACTTGTGAATAATAGAGGTTTCGAAGCAAGAGGTTCCAATGTTTCCTCAGATATTTATCCATGGACAGTTATCGGAAAAGATAAATCATCTATTATCGTATCAACGGACCTTTCCTCTTGTTTTGAGCGTAATAAGGTCGCTTTACGTATGGATATTCTTTGTCAAGGACAATCTTGTCCACCTGGTGGTGTCGGTATCTCCAATCCAGGTTTTTGGGGAATGAACATTGAACAAGGGAACAAGTATAAAGTAGTGTTCTATGTTAGATCACTTGGTCCAATAGATTTACAAATTTCATTTGTCGGATCCGATAATGGTGTAAAATTGGCTTCAACCAACATAAgGGCTTTTGGACTTAATGTATCAAAGTGGAGTAAGATAGAGACGACTCTTCAAGCAAATGCTACAAATTATAATTCGAGTCTACGaataacaacaaataatagAGGAATACTTTGGTTAGATCAAGTGTCAGCTATGCCTTTGGATACATATAAGGGTCATGGTTTTCGCAGTGACCTTTTTCAAATGGTTGCAAATCTAAAACCAAAAATTTTTAGGTTTCCAGGTGGTTGTTATGTCGAAGGAAATTATCTTAAAAATGCATTTAGATGGAAAGATACTGTTGGACCATGGGAAGAAAGACCTGGCCACTTTAATGACATCTGGGATTATTGGACCGATGATGGGTTTGGTTTTTTTGAGGGGCTCCAACTATCAGAGGATCTTGGTGCATTTCCAATATGGGTGTTTAATAATGGTATTTTGTTCTCCCTAAAAGATCCATTCAAAAATCTAGAAGCTCTAGATGGTATTGAGTTTGCTAGAGGTTCTCCCACATCACAATGGGGTTCTCTTAGAGCTTCCATGGGACATCCTGAACCATTTGATTTGAGATTTGTTGCTGTTGGAAATGAAGATTGCGGTAAAGATAATTATATAGGATATTATCTGAAGTTTTATGAAGCTATAAAGCGTACATATCCTGATATTCAAATTATCTCAAATTGTGACGGTTCTGAAAAACCATTAAATCATTCGGCTGATCTCTATGATTTTCATattTATACAAATGCTGAGGACATGTTTTCCATGTATACCAAGTTTGATAATGCACCACGATCCGGCCCAAAGGCATTTGTGAGTGAATATGCTGTTTGGAAGGAAGATGCTGGTTCTGGAAGCCTTTTGGCTGCATTGGGCGAAGCTGGATTTCTTATTGGGCTTGAAAAAAATAGTGATATTGTCAGCATGGTCTCCTATGCACccttgtttttaaacacaaatgATAGGAAGTGGATACCCGATGCAATTGTTTTTAACTCTTATCAGAATTATGGAACTCCGAGTTATTGGCTCCAACAACTTTTTATTGATTCTAGTGGAGCAACCTTGCTTAATTCAACTCTCCAAAATTCTTCTAGCTCAATTGTTGCATCCgcaattgagtataaaaattcTCAAGATGGGAAGAAATATCTGAAAGTAAAGGTAGTAAACTTTGGAAATGCCACCGAGAACTTTGAAATCTCAATAAACGGCTTAAACTCAAGTGTTCAACCATTTGGTTCGTCAATAATAGTGCTTACATCTGCCAATACAATGGATGAAAATTCCTTCTCAGAACCGAATAAGATTGTGCTGCAGCGAACTTCACTTAAAAATGCAAGCAATGACATGAATGTTGAACTTCCTCCTTATTCAGTTACATCATTTGAtctattgatttaa 1932 0.3551 MAFSRSFSAFLFSLIVCLVISKCQANANVSISKLVINASSTRPIPNTFFGAFFEEINHAGAGGLWAELVNNRGFEARGSNVSSDIYPWTVIGKDKSSIIVSTDLSSCFERNKVALRMDILCQGQSCPPGGVGISNPGFWGMNIEQGNKYKVVFYVRSLGPIDLQISFVGSDNGVKLASTNIRAFGLNVSKWSKIETTLQANATNYNSSLRITTNNRGILWLDQVSAMPLDTYKGHGFRSDLFQMVANLKPKIFRFPGGCYVEGNYLKNAFRWKDTVGPWEERPGHFNDIWDYWTDDGFGFFEGLQLSEDLGAFPIWVFNNGILFSLKDPFKNLEALDGIEFARGSPTSQWGSLRASMGHPEPFDLRFVAVGNEDCGKDNYIGYYLKFYEAIKRTYPDIQIISNCDGSEKPLNHSADLYDFHIYTNAEDMFSMYTKFDNAPRSGPKAFVSEYAVWKEDAGSGSLLAALGEAGFLIGLEKNSDIVSMVSYAPLFLNTNDRKWIPDAIVFNSYQNYGTPSYWLQQLFIDSSGATLLNSTLQNSSSSIVASAIEYKNSQDGKKYLKVKVVNFGNATENFEISINGLNSSVQPFGSSIIVLTSANTMDENSFSEPNKIVLQRTSLKNASNDMNVELPPYSVTSFDLLI 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03131 643 Gene3D - 74 221 - -
Tsu07g03131 643 SMART alpha_l_af_c 449 635 IPR010720 GO:0046373|GO:0046556
Tsu07g03131 643 SUPERFAMILY (Trans)glycosidases 208 532 IPR017853 -
Tsu07g03131 643 Gene3D - 525 641 IPR013780 -
Tsu07g03131 643 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 7 643 - -
Tsu07g03131 643 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 7 643 - -
Tsu07g03131 643 Gene3D Glycosidases 222 524 - -
Tsu07g03131 643 Pfam Alpha-L-arabinofuranosidase C-terminal domain 450 635 IPR010720 GO:0046373|GO:0046556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03131 Tsu-Chr7 37235980 37240272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03131 5 642 Glycoside Hydrolase AT3G10740 60.856 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03131 K01209 - gmx:100812156 929.087