Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03111 ATGAGCGACGACATATTTGACGAACAAATATTAGCAGAGAAGTTGTTGAAACTCAACAATTCACAACAAAGCATTGAATCATTGTCCCGTTGGTGCATTCCTCACCAGAAGAGAGCAAAGGATATTGTTGAAACATGGGATAAATTGTTCAATGCATCCCAGAAAGAGCAGCGTGTCGCTTTTTTAAACTTGGCCAATGATATCTTGCAAAATAGTAGGCGGAAAGGTAGTGAGTTTGTCAATGAATTTTGGAAAGTTCTTCCAGCAGCTCTCAGGTGTGTTTATGAAAGTGGTGATCTACATGGAAGGAAAGCAGTGAACAGACTTATTGACATATGGGAGGAGAGGAAGGTTTTTGGGTCGCGAAGTCAGGGTCTTAAGGATGAACTGATGAGCAAGAATCCCCTTCCATGCTCTGCAAGCAATGGAAAAGGTTCAGATTCTATCAAGATAGTGAAGAGGGATGCCCACTCAGTGAGAATAAAACTGGCTGTTGGGTGTTTGCCAGAAAAAATACTAACAGCATTTCACTCTGTTCTGGATGGACATTTTGATGAGGAAGCTGCCTTGGATAAGTGTAATACTGGTGTACATGATGTGGTTAAACTCTTGGAAGATGTCGACAAAACATTGGCTCAAGGGAACCAGCTGGGATCCACTTTGGTGAATGACTTGCAAGAGCGGGAAAAGGAGCTTAAGCAATATATGGAGCAACTCGAAAATGCCGATGCTGCCAGGACTTCTTTGCTTTCTCAGCTTAAAGATGCACTGCAGGAACAAGAATCAAAGCAAGAGCTTGTTCGCGCTCAGTTGCTAGTTGTACGAGGCCAGATTGAGAAAACAGCTGGTATCAGGAAGTGGCTCGACCAAACAACACAATCCATGCATCCATCAGTTCAACCAAACAACACCACTTCCCAACCTGATTTTACGCAATCTTCTGCATCATTTTCACCTTTTCGAACTTCTGAAGAAGATAACAAGAAGGCAGCAGCAGCAGCTGTTGCTGCTAAGCTCGCTGCCTCTGCATCATCTGCTCAGATGCTTGCATCTGCTTTTTCTTCTCTAGTGGCTGAAGAAGCTGCCTCCATGAATAGTAGCTTAAATTCCAAGGCATTTACATCAGGATTACCTATTTTCAACCCAGAGAAAAGGCCCAGAATTGAAAAATCATCACCTGTTTCTGATGTTAACAGCTCCGATATGGCGAGCTCTTCCTTTTTCACCACTTTACAACAGCCACCGTTAACAAATCAACAGTTTGTTCCGTCAGCCAACATGCAAACCATGCCTCAAGTCAACCAATTACAAGCTGCATTTGCTTCAGCACCCCTTCCCCCTCAGTATGTCCAATCAACCGGTTTCATGGATGGAACAATTCCTTACGGATACATATCAAATAACCTACCACCTCCACCTCATTTTCCTCCACATGCCGCACCTAGCTCTCAACCAGTGCAGCAGCAACAGCAGTCCTCACCGGGAGGATTTTACAGGCCACCTGGCATTGGATTTTATGGGCAAAGCCACCCGTCAACGCCACCACCAGTTCATAGGCAGTGA 1563 0.4447 MSDDIFDEQILAEKLLKLNNSQQSIESLSRWCIPHQKRAKDIVETWDKLFNASQKEQRVAFLNLANDILQNSRRKGSEFVNEFWKVLPAALRCVYESGDLHGRKAVNRLIDIWEERKVFGSRSQGLKDELMSKNPLPCSASNGKGSDSIKIVKRDAHSVRIKLAVGCLPEKILTAFHSVLDGHFDEEAALDKCNTGVHDVVKLLEDVDKTLAQGNQLGSTLVNDLQEREKELKQYMEQLENADAARTSLLSQLKDALQEQESKQELVRAQLLVVRGQIEKTAGIRKWLDQTTQSMHPSVQPNNTTSQPDFTQSSASFSPFRTSEEDNKKAAAAAVAAKLAASASSAQMLASAFSSLVAEEAASMNSSLNSKAFTSGLPIFNPEKRPRIEKSSPVSDVNSSDMASSSFFTTLQQPPLTNQQFVPSANMQTMPQVNQLQAAFASAPLPPQYVQSTGFMDGTIPYGYISNNLPPPPHFPPHAAPSSQPVQQQQQSSPGGFYRPPGIGFYGQSHPSTPPPVHRQ 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03111 520 CDD CID_RPRD_like 8 131 - -
Tsu07g03111 520 MobiDBLite consensus disorder prediction 294 323 - -
Tsu07g03111 520 Pfam CID domain 10 121 IPR006569 -
Tsu07g03111 520 Gene3D - 4 134 IPR008942 -
Tsu07g03111 520 MobiDBLite consensus disorder prediction 466 480 - -
Tsu07g03111 520 SUPERFAMILY ENTH/VHS domain 15 119 IPR008942 -
Tsu07g03111 520 PANTHER RNA POLYMERASE II-BINDING DOMAIN PROTEIN 1 520 - -
Tsu07g03111 520 ProSiteProfiles CID domain profile. 3 135 IPR006569 -
Tsu07g03111 520 SMART 558neu5 10 131 IPR006569 -
Tsu07g03111 520 MobiDBLite consensus disorder prediction 466 520 - -
Tsu07g03111 520 MobiDBLite consensus disorder prediction 294 321 - -
Tsu07g03111 520 MobiDBLite consensus disorder prediction 481 496 - -
Tsu07g03111 520 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 1 520 - -
Tsu07g03111 520 Coils Coil 222 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03111 Tsu-Chr7 37081247 37093009 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03111 K15559 - gmx:100814308 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03111 07 37081247 37093009 Tsu07g03111 07 37081247 37093009 ECH