Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03109 atggaaaaaaatctaaaacaaaatctactaataaaaaattcaccatcatcaccatcatcatcagaagAAGGTGAAGAGTCACTTGGGAAAAGGGTGTGGAATGAAACAAAACTTATGTGGGTAGTTGCAGCACCAGCTATATTCACAAGATTTTCAACTTTTGGTATTCAAGTTATTAGTCAAGCTTTTGTTGGTCATATTGGTTCTAAAGAACTTGCTGCTTTTGCTCTTGTTTTCACTGTTCTTATTAGGTTTGCTAATGGTATTCTTTTGGGAATGGCGAGTGCGTTGGCGACCCTTTGTGGACAAGCATATGGTGCAAAAGAACATGGAATGATGGGAGTGTATCTTCAAAGATCATGGATAGTGTTATTCTTAACAGCACTAATTCTTCTTCCTGTATTTTTTTTCACAACTCCACTTTTGAATCTCTTAGGCCAAGATGAAAGCATAGCAGAAGTTGCAGGAACCATTTCTCTTTGGTCAATTCCTGTTATGTTTGCTTTCATTGTCTCATTCACTTGTCAAACATTCCTTCAATCACAAAGCAAGAACACCATCATTGCATTTTTGGCAGCGTTTTCCATTATCATTCATGCATTCCTCTCCTGGCTTTTGACAATGAAATACAAATTTGGGATTGCTGGTGCAATGATTTCAACAAGTTTGGCTTATTGGATTCCCAACATTGGTCAACTTATATTTGTTACATGTGGTTGGTGCCCTGAAACTTGGAAAGGTTTCTCATTCTTAGCATTCAAAGACCTTTGGCCTGTTGTCAAACTTTCCCTTTCAGCTGGTGCCATGTTGTGTCTTGAGCTATGGTACAATTCAATATTGGTTCTTTTGACAGGAAACATGAAAAATGCAGAGGTTGAAATTGATGCACTATCCATCTGTCTCAACATCAATGGATGGGAAATGATGATATCACTTGGTTTCATGGCTGCAGCAAGTGTTCGAGTATCAAATGAGCTTGGTAAAGGAAGTGCCAAAGCTGCAAAGTTCTCGATTATTGTCACAGTGCTTACATCGTTGGCCATCGGAACCTTTCtgtttgtgtttttcttaatttttaggGAAAGACTTGCTTATATATTTACCGATAATAAAGAGGTGGCCGCAGCTGTCGGAGATTTATCACCTTTGTTATCGATCTCTATACTGCTAAACAGTGTTCAACCAGTTCTCTCAGGAGTGGCGATTGGAGCTGGCTGGCAAAGCATTGTTGCATATGTCAACATATGTTGTTATTACATCATAGGTATTCCTGTTGGGATTGTGCTTGGTAATGTTATCCATTGGCAAGTCAAGGTATGCTTTTACCATCCCTCTTCTTGTTTTCATTTTGCGCTTATATCAAGCACTGACACAGACACACAACACCAACATGTTCACCCTGGTAAGAATTTGAGAAATAAATACATGAGTCAGTGTCATGTCGTGTCTGTGTCAGTCACCGACAcatgtcggacaccgacacatgtCAGACGCCTTCAATCTGAAGTTTCTCTACTTAGTTATATCTTGATGCTTACTAattaa 1545 0.3644 MEKNLKQNLLIKNSPSSPSSSEEGEESLGKRVWNETKLMWVVAAPAIFTRFSTFGIQVISQAFVGHIGSKELAAFALVFTVLIRFANGILLGMASALATLCGQAYGAKEHGMMGVYLQRSWIVLFLTALILLPVFFFTTPLLNLLGQDESIAEVAGTISLWSIPVMFAFIVSFTCQTFLQSQSKNTIIAFLAAFSIIIHAFLSWLLTMKYKFGIAGAMISTSLAYWIPNIGQLIFVTCGWCPETWKGFSFLAFKDLWPVVKLSLSAGAMLCLELWYNSILVLLTGNMKNAEVEIDALSICLNINGWEMMISLGFMAAASVRVSNELGKGSAKAAKFSIIVTVLTSLAIGTFLFVFFLIFRERLAYIFTDNKEVAAAVGDLSPLLSISILLNSVQPVLSGVAIGAGWQSIVAYVNICCYYIIGIPVGIVLGNVIHWQVKVCFYHPSSCFHFALISSTDTDTQHQHVHPGKNLRNKYMSQCHVVSVSVTDTCRTPTHVRRLQSEVSLLSYILMLTN 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03109 514 Pfam MatE 268 427 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu07g03109 514 Pfam MatE 45 205 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu07g03109 514 PANTHER MULTIDRUG RESISTANCE PROTEIN 17 440 - -
Tsu07g03109 514 PANTHER PROTEIN DETOXIFICATION 17 440 - -
Tsu07g03109 514 MobiDBLite consensus disorder prediction 1 26 - -
Tsu07g03109 514 TIGRFAM matE: MATE efflux family protein 45 436 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu07g03109 514 MobiDBLite consensus disorder prediction 7 23 - -
Tsu07g03109 514 CDD MATE_eukaryotic 35 438 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03109 Tsu-Chr7 37046569 37050800 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03109 K03327 - gmx:100792122 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03109 07 37046569 37050800 Tsu07g03109 07 37046569 37050800 ECH