Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03106 atggGAGAAGAGTTAAAGAAGAACCTTTTGCAGCATCAAAACattttagaagatgaagaagagcCACTAACCAAAAGGATATGGAAAGAAAGCAAGAAGATGTGGAAAGTATCAGGTCCTGCCATATTCAATAGGTTTTCAACTTTTGGTATCCAAGTTGTTGCTCAATCTTTCATTGGTCATATCGGTTCAACTGAATTAGCTGCTTATGCCATTGTTACGACTGTCCTAGTTAGATTTGGAAATGGTATTCTGTTGGGCATGGCAAGTGCATTGGATACACTATGTGGACAAGCATATGGagcaaaaaaatatgatatgctAGGAGTGTATCTTCAAAGATCATGGATAGTTATATTCATAAcctcaatttttcttcttccaatttACATTTTTACAACTCCAATTTTAGTGGCACTTGGCCAAGATAAAATTATTGCACAAGTTGCAGGAAGCATTTCAATATGGTCAATAGgtatcatattttcttttgcaGTCTCATTCACTTGTCAAATGTTCCTACAAGCACAAAGCAAGAACAAGATTATTGCTTATCTTGCAGCTTTTTCAATTGCAATTCATGTTTATTTGTCATGGCTTTTAACTGTTAAGTTCAAGTTTGGACTTAATGGTGCAATGACATCAATCATATTGGCTTATTGGATACCAAATTTGGGCCAACTTATTTATATCATGACAAAATGTCCTGAGACATGGAAGGGTTTCTCATTTTTGGCTTTTAAAGATCTTTGGCCTGTTATCAAGCTTTCTTTGTCTTCTGGAGCTATGTTATGTCTTGAAATATGGTACAACACAGTTTTGATTCTACTAACAGGGAACATGAAAAATTCTGAGATTGCCATTGATGCTCTGGCCATATGCCTCAACATCAATGGATGGGAAATGATGATATCCATTGGTTTCATGGCTGCAGCAAGTGTTAGGGTATCAAATGAACTTGGAAGAGGGAGTTCAAAGGCAGCAAAATTTTCCATTGTGATAGCAGTGCTCACATCATTTTCCATTGGATTTGTGCTATTCTTGATCTTTCTATTCCTAAGGGAAAAACTTGCTTACATTTTCACTCCAAGTCCAGATGTGGCTAATGCAGTTGGTGATCTATCACCTTTGTTGTCAATCTCCATATTGTTGAACAGTGTCCAACCTGTGCTCTCTGTAGGAGTTGCTGTTGGAGCTGGTTGGCAGAGCATTGTAGCATATGTAAACATAGGTTCATATTACCTCATTGGTATTCCTTTTGGAGTGGTGCTTGGCAAGCTTCTCCATTTGCAAGTTAAGGGAATTTGGATTGGAATGTTGTTTGGAATATTTGTTCAAACCATAATGCTTATCACAATAGCATTTAAAACTGACTGGGACAAGCAGGTTGAGATTGCTCGAAATCGTGTTAACAAATGGGCTGTAGTGAAGAATGATGAATCAAACAACACATCAAGTATATCTAGTTAA 1470 0.3517 MGEELKKNLLQHQNILEDEEEPLTKRIWKESKKMWKVSGPAIFNRFSTFGIQVVAQSFIGHIGSTELAAYAIVTTVLVRFGNGILLGMASALDTLCGQAYGAKKYDMLGVYLQRSWIVIFITSIFLLPIYIFTTPILVALGQDKIIAQVAGSISIWSIGIIFSFAVSFTCQMFLQAQSKNKIIAYLAAFSIAIHVYLSWLLTVKFKFGLNGAMTSIILAYWIPNLGQLIYIMTKCPETWKGFSFLAFKDLWPVIKLSLSSGAMLCLEIWYNTVLILLTGNMKNSEIAIDALAICLNINGWEMMISIGFMAAASVRVSNELGRGSSKAAKFSIVIAVLTSFSIGFVLFLIFLFLREKLAYIFTPSPDVANAVGDLSPLLSISILLNSVQPVLSVGVAVGAGWQSIVAYVNIGSYYLIGIPFGVVLGKLLHLQVKGIWIGMLFGIFVQTIMLITIAFKTDWDKQVEIARNRVNKWAVVKNDESNNTSSISS 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03106 489 CDD MATE_eukaryotic 30 464 IPR045069 GO:0042910|GO:1990961
Tsu07g03106 489 PANTHER PROTEIN DETOXIFICATION 15 475 - -
Tsu07g03106 489 PANTHER MULTIDRUG RESISTANCE PROTEIN 15 475 - -
Tsu07g03106 489 Pfam MatE 262 422 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu07g03106 489 Pfam MatE 40 200 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tsu07g03106 489 TIGRFAM matE: MATE efflux family protein 40 436 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03106 Tsu-Chr7 37022192 37030954 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03106 K03327 - gmx:100775619 776.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03106 07 37022192 37030954 Tsu07g03106 07 37022192 37030954 ECH