Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03101 ATGGAATCAAGCGTTCTCGAATGCATCGGTGTAGAGATAATCGGAGTAATGTCACCGGTATCAATCTGCATGTTCCTCGTCGTCCTCCTCGTTTACTCTCTTTCCACTTCCTCCTCCCCTGAAACCACCATAACCACCGCCGCAAATCTCGTCTACGCCGAAAACCCTTCCGACACCACAACACAAAAACTCGAAGGCGCACTTCTAAACGCCGTCGTTTTCGTAATCCTAATCGCAATCGTGACATTCCTTCTCGTTCTCCTTTACTACTACAATTGCACTTCCTTCCTCCGTAACTACGTTCGTTTCTCCGCTTTCTTCGTTCTCGCTTCTATGGGTGGATCCATTTTCCTTTCACTAATTCAACGTTTCTCTATTCCTTTAGATTCAATTACttgcttcattcttctcttcaaTTTCACTATTATCGGTGTTCTTTCAATTTTCGCTTCTGCTATTCCGATTATTCTTCGTCAGTGTTATATGGTTTGTTTAGGTATTATCGTTGCTGCGTGGTTCACGAAGCTTCCTGAATGGACCACGTGGACACTTCTTGTTGCTCTTGCTGTTTACGATCTTGTTGCTGTTTTAGCTCCCGGTGGTCCTTTGAAGCTTCTCGTTGATTTGGCTTCTAGCCGCAACGAGGAGCTTCCTGCTCTTATCTATGAAGCTCGCCCTACCGTTGCACCAACAGGTAGGGCGGCTGCATTAGGGTTTTTGGTTGCTGGAGTTGCCGATTCAGAATCATCGTCGATTGAGCTTCAGGTAGTCCCCACTGAGAATCAGAGTAATAGTAACAGTAACAGTAAcagtaatagtaatagtaatgcTCAGGGTGCTGGTGGTAGTGGTGGTGGTAGTCGTGGTGATTCTGTGGCTGTTGTTAGGGTTGAGGATTTTGTAAATGATGAAGGGGAAAGATCACCGTTGGTAGGTAATGCGATTCGCGATGAGGAAAGGTCTCCACTTGTTGAGGTGATGGGGAATGAGAGAGAAATAGGGACAATGAGGAGGGAAGTTGAGGAAGTTACTGAGAGAGGGATTAAGCTTGGACTTGGTGATTTTGTATTCTACAGTGTGCTTGTGGGTAGAGCTGCAATGTATGATCTTATGACTGTTTATGCTTGTTATCTTGCAATTATATCTGGACTTGGTTGCACTCTTATCTTGTTATCGGTTTGTCGTCATGCTTTGCCTGCTCTTCCGATTTCGATTGCGTTGGGTGTGCTTTTCTATTTCTTGACTAGATTGTTAATGGAGCCTTTTATTGTTGGAACTGCTACAaatttgatgatgttttga 1302 0.4286 MESSVLECIGVEIIGVMSPVSICMFLVVLLVYSLSTSSSPETTITTAANLVYAENPSDTTTQKLEGALLNAVVFVILIAIVTFLLVLLYYYNCTSFLRNYVRFSAFFVLASMGGSIFLSLIQRFSIPLDSITCFILLFNFTIIGVLSIFASAIPIILRQCYMVCLGIIVAAWFTKLPEWTTWTLLVALAVYDLVAVLAPGGPLKLLVDLASSRNEELPALIYEARPTVAPTGRAAALGFLVAGVADSESSSIELQVVPTENQSNSNSNSNSNSNSNAQGAGGSGGGSRGDSVAVVRVEDFVNDEGERSPLVGNAIRDEERSPLVEVMGNEREIGTMRREVEEVTERGIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCRHALPALPISIALGVLFYFLTRLLMEPFIVGTATNLMMF 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03101 433 MobiDBLite consensus disorder prediction 257 289 - -
Tsu07g03101 433 Pfam Presenilin 11 423 IPR001108 GO:0004190|GO:0016021|GO:0016485
Tsu07g03101 433 PRINTS Presenilin family signature 17 27 IPR001108 GO:0004190|GO:0016021|GO:0016485
Tsu07g03101 433 PRINTS Presenilin family signature 175 182 IPR001108 GO:0004190|GO:0016021|GO:0016485
Tsu07g03101 433 PRINTS Presenilin family signature 192 209 IPR001108 GO:0004190|GO:0016021|GO:0016485
Tsu07g03101 433 PANTHER PRESENILIN 1 433 - -
Tsu07g03101 433 SMART psh_8 65 419 IPR006639 GO:0004190|GO:0016021
Tsu07g03101 433 PANTHER PRESENILIN 1 433 IPR001108 GO:0004190|GO:0016021|GO:0016485
Tsu07g03101 433 MobiDBLite consensus disorder prediction 257 282 - -
Tsu07g03101 433 Gene3D Presenilin 325 424 IPR042524 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03101 Tsu-Chr7 36910997 36913098 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03101 1 433 Miscellaneous Gene Families AT1G08700 63.326 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03101 K04505 - gmx:100819461 552.362