Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03087 ATGTCCCTAGCAGTTTCCTCCTCACCAAAAAAATGGATGAGAAATTGTGTTGGAGTACTCAACTCATGCATATGTTACCTTGTTTTCCTCATCTTTGATCTTCTTGATGCTGTTTTATGCATTATCTATAGATACCTTGATGAGCGCATTGAAGGGGTAGCTTCTCCTTGTTGTTGCTCTAAATGGGAGAGACAAGAAAAGAAGATTATGATGaataatgaagatgatgatcttTCAGAGAGTTTGTATGAGAGGAAGAGCATGTTTAGAGAAATGGGTTTGCTtcaatttggaagaaaaagGGAAGATTCTAATGGAAAATGTGGTGGAAGGAAAGTCAATTGTTGGTCTGATTGTGGGTGTGAGTCTTGTCTTTCTTGGGTGAAGGGTGGTGATGACTATAAACTTCATTTTGTTGTTAAGGAACCCTTATTAGCCACTAGTGAAAACTGCAGGGGAGAGCCTTATGAGAATGTGATATTCTTGCATGGATTTATGTGTTCTTCATCATTTTGGACTCAGACAGTGTTTCCATGTTTCTCTGAAAATGTAAATCATAACTACAGATTGATTGCCATAGATCTATTGGGATTTGGAAAGAGTCCAAAGCCAAGAGATTGTTTGTATACTTTGAAGGATCATGTTGAAATGATTGAGAAATCTGTTGTTCAACCATTGCATTTAGGTACTTTTCATTTGGTTGCTCACTCTATGGGGAGTGTAATTGCATTGGCTTTGGCTGCTAAGTACCACAACTGTGTCAAATCAATCACTCTTGTTGCACCTCCATACTCATCTTCTGAGGGAAATGATGTTTGTTTGAATGCACTTGAAAAGTTTGCTGGAAAGAAATTGTGGCCAATGTTATCAGCTGGTTCTTCATTTATGTCATGGTATGAGCATTTGGGTCGAACTGTTTGTTTCATCTATTGCAGAAATCACAGGATATGGGAGAGGATTCTAAAATTCATTACTCGAAAGAGGGATCATAACTTCTTGATAATAGACATGACTAAACATACTCATCAATCTGCTTGGAGTTCCATGCATAATGTGATATGTGGTGGAGCAAAATTCATGGATAGTTACTtgaaaattttgacaaaaagtaGAGTTAGAATAAATGTTATACAAGGTGATAAAGATCAAGTTGTCCCAAGAGAATGCATTAGTAAATTGAAGTTGAAGGCTCCACATGCTGAAATTAACATAATTCCTAATGCAGATCATAGCACTGTGCTATTAGGCAGAGAGAAGAAATTTGCACAAAATTTGGAGCATACATGGGCATCTTGCTAG 1299 0.3603 MSLAVSSSPKKWMRNCVGVLNSCICYLVFLIFDLLDAVLCIIYRYLDERIEGVASPCCCSKWERQEKKIMMNNEDDDLSESLYERKSMFREMGLLQFGRKREDSNGKCGGRKVNCWSDCGCESCLSWVKGGDDYKLHFVVKEPLLATSENCRGEPYENVIFLHGFMCSSSFWTQTVFPCFSENVNHNYRLIAIDLLGFGKSPKPRDCLYTLKDHVEMIEKSVVQPLHLGTFHLVAHSMGSVIALALAAKYHNCVKSITLVAPPYSSSEGNDVCLNALEKFAGKKLWPMLSAGSSFMSWYEHLGRTVCFIYCRNHRIWERILKFITRKRDHNFLIIDMTKHTHQSAWSSMHNVICGGAKFMDSYLKILTKSRVRINVIQGDKDQVVPRECISKLKLKAPHAEINIIPNADHSTVLLGREKKFAQNLEHTWASC 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03087 432 PRINTS Alpha/beta hydrolase fold signature 247 260 IPR000073 -
Tsu07g03087 432 PRINTS Alpha/beta hydrolase fold signature 233 246 IPR000073 -
Tsu07g03087 432 PRINTS Alpha/beta hydrolase fold signature 187 202 IPR000073 -
Tsu07g03087 432 SUPERFAMILY alpha/beta-Hydrolases 131 412 IPR029058 -
Tsu07g03087 432 PANTHER LYSOPHOSPHOLIPASE BODYGUARD 4-RELATED 32 432 - -
Tsu07g03087 432 Gene3D alpha/beta hydrolase 128 431 IPR029058 -
Tsu07g03087 432 PANTHER HYDROLASE 32 432 - -
Tsu07g03087 432 Pfam alpha/beta hydrolase fold 159 265 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03087 Tsu-Chr7 36782680 36784934 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03087 19 432 Acyl Lipid Metabolism Gene Families AT5G17780 49.526 1.46e-143 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03087 - - gmx:100775258 676.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03087 07 36782680 36784934 Tsu07g03087 07 36782680 36784934 ECH