Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03085 ATGATGGTCTCCAAGCTGCTTTTGCAGAGAAGGCTCTTCAGGTTCTTGCAACTGTCACCATCCTCATTATgctcattttcttcttcatcttccatTCATGGGTCCCCATTCCATTCTGTGAAAACAACAGAAGTCTTGAGTCTCTCAACTTCTTCTAGAAACTTCTGCTCTCGGAAGTCCAATCTTGTTGATCAATTTCATGGCCCCGCACCTATTGATTATAGTTCTCTGCTGCAGGAAGGTGAATTCCATAGACTAGCTGATTCCACGATAAATAGCCTTCAAGAGAAATTTGAGGACTATGGAGACTCTATTGATCTTGATGGATTTGATATAGACTATGGGAATGATGTTTTGACTGTCAAACTTGGGGATCTGGGCACCTATGTATTGAACAAACAAACACCAAATAGACAACTCTGGTTGTCGTCGCCAGTGAGCGGTCCATCTAGGTTTGATTGGGATCAGGATACTAAAGCTTGGATTTATAGGCGGAACAAAGCAaagttatataaaattttagaagATGAGTTGGAGCAGCTGTGTGGCAAACCTATTGTTCTCTCCTAA 570 0.393 MMVSKLLLQRRLFRFLQLSPSSLCSFSSSSSIHGSPFHSVKTTEVLSLSTSSRNFCSRKSNLVDQFHGPAPIDYSSLLQEGEFHRLADSTINSLQEKFEDYGDSIDLDGFDIDYGNDVLTVKLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQDTKAWIYRRNKAKLYKILEDELEQLCGKPIVLS 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03085 189 SMART Frataxin_Cyay_2 78 189 IPR002908 GO:0008199|GO:0016226
Tsu07g03085 189 TIGRFAM FeS_CyaY: iron donor protein CyaY 80 187 IPR002908 GO:0008199|GO:0016226
Tsu07g03085 189 CDD Frataxin 78 186 - -
Tsu07g03085 189 Pfam Frataxin-like domain 79 185 IPR002908 GO:0008199|GO:0016226
Tsu07g03085 189 PANTHER FRATAXIN 19 187 IPR002908 GO:0008199|GO:0016226
Tsu07g03085 189 TIGRFAM mito_frataxin: frataxin 82 179 IPR017789 GO:0004322|GO:0005739
Tsu07g03085 189 ProSitePatterns Frataxin family signature. 130 144 IPR020895 -
Tsu07g03085 189 Gene3D Frataxin/CyaY 72 189 IPR036524 GO:0008199|GO:0016226
Tsu07g03085 189 ProSiteProfiles Frataxin family profile. 78 186 IPR002908 GO:0008199|GO:0016226
Tsu07g03085 189 SUPERFAMILY Frataxin/Nqo15-like 70 186 IPR036524 GO:0008199|GO:0016226
Tsu07g03085 189 PRINTS Frataxin signature 78 96 IPR002908 GO:0008199|GO:0016226
Tsu07g03085 189 PRINTS Frataxin signature 131 146 IPR002908 GO:0008199|GO:0016226
Tsu07g03085 189 PRINTS Frataxin signature 116 131 IPR002908 GO:0008199|GO:0016226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03085 K19054 - gmx:100815916 261.151