Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03063 ATGGCCACTTTGAATAATCATACCAGAACCACACAACTACAAATTGAGGCACAAGATTCAAGCTTTGTGAACACAACAACAGTGGCAGGAGAAACAGTGAGAAAAGCATTCAAGATTCTTTTCTACTTGAATCTGGTTTTGATTTCATTCTTGGTGATTTTCATCACCATCTATGGTCTTATCTTAGACTCTTTAACTCACCATTTCCATCCTGAGAAATGGTATCCTCCACTTCTAGTATCAACAGTATGTGCTGGAATTCTTGGTTTCACGTGGCAATGGATCGTCGCAAGCCATCCGAAAAAGGCACTCAAGGCAGCATTTTGGTTGAGTCCAttgttaacatgtgcaatggGAATTCTTTTTGTGTTAATTGGTTCTGCGTTAAGTTTGATAGCTGGTATAGTTTCTTTGGTTTCTGCAGTGATTCAATCTCTCTATGGTTGTTGGGTTAGTAAGAGGTTTGTATACGCTGCAGAAATCTTTTCGGTTTCAATAGCTTATCCTCCTGCTAAAACCAAGTTCTTAGCATGTTCGTTGATCATCGTCAGTACTATTTACTGTTGTTTTCTGGTGGCTGGAATCGGAGGGGCAAGAGCTATGGAACACAGAACCAAACTAGCCGACGTTTTCATCTTAGTAATCATGCTGAGCTTAGGTTGGACTATGCATGTTATGAAGAATGCAATGCAAGTCACAGTTTCAAGGGTCAAGTATATGCATTTTTCTGGAGGAGGAGACATCGACACTAGAGTTGCATTTCGTGACACAATCGGGCACTTAATTGGAAGTGTTTCCGTAGGCTCTATCCTCGTACCTATCATCGGACTCTTCCGAGGCTTTGCGCGATCAACAAGTCTGATTGGAGGAGAAACAAACGAGTGCATGTTTTCTTGTGTTAGTTGTTCGATGGGAATTGCGTCGCTTCTTGTGACAAAGGGGAATAGATGGGGTTTTGTTCATGTTGGAGTTTATAACAAAGGGTTTGTGCAAGCATCTTCTGATACTTGGGAAATGTTCATTAGAGTTGGATTAGAGGAATTGATAAACTTAGATCTCACTGGTACATTCTGTTTTCTTAGTGGTGTTTCAGTTGGTGCAATTTGTAGTCTTGTGAGTGGAATTTGGAGTCTTGTAGAGTACAAGGACTATGCTATGGAAGTATCCACTTATGCTTTCTTCATTGGCTATTTCGTGTGTAGGTTGGCTATTGCATGGCCACAAGCATGTGTTTCAGCTTACTATGTGGCCTATGCAGAGAATCCACAAAGCACTCAATTTGACTCAACTATTCCAGTACGTTTGGAACAGCTTCACAGATCTCAAGCTTTACAAGATCTTACTGAGTTAAGAACAATTAGATGA 1365 0.4015 MATLNNHTRTTQLQIEAQDSSFVNTTTVAGETVRKAFKILFYLNLVLISFLVIFITIYGLILDSLTHHFHPEKWYPPLLVSTVCAGILGFTWQWIVASHPKKALKAAFWLSPLLTCAMGILFVLIGSALSLIAGIVSLVSAVIQSLYGCWVSKRFVYAAEIFSVSIAYPPAKTKFLACSLIIVSTIYCCFLVAGIGGARAMEHRTKLADVFILVIMLSLGWTMHVMKNAMQVTVSRVKYMHFSGGGDIDTRVAFRDTIGHLIGSVSVGSILVPIIGLFRGFARSTSLIGGETNECMFSCVSCSMGIASLLVTKGNRWGFVHVGVYNKGFVQASSDTWEMFIRVGLEELINLDLTGTFCFLSGVSVGAICSLVSGIWSLVEYKDYAMEVSTYAFFIGYFVCRLAIAWPQACVSAYYVAYAENPQSTQFDSTIPVRLEQLHRSQALQDLTELRTIR 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03063 454 Pfam Plasma-membrane choline transporter 136 422 IPR007603 GO:0022857|GO:0055085
Tsu07g03063 454 PANTHER F20H23.27 PROTEIN-RELATED 13 442 - -
Tsu07g03063 454 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 13 442 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03063 Tsu-Chr7 36495999 36498144 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03063 - - aprc:113862224 681.404