Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03060 ATGACTGACCTCTTGAGTTCATTGATTACAGATCCTAATGGGTCGAGGGGTGTGGTGAACATGGAACAGCATATTCACTGTATGGAAATTCTTGCTTACAGTTCCTTGTTGAAGGCTTTTATTGCTCAATCAGAACTTCTTACTTGGGGAAAAGAGGAGCTCTTGACTGAAATACGGAAGGAACTACATATTGCAGATTTTGAACATGGAGAAATTCTGACTAAAATAAACTCTGATGAGACTATTAAACGACTAAGGGAGCAAAGGAAAATGGCATCTCATTCTCATGATCAGGCATATAATAATGCTAATACTACTGGGCGTCCGTCCGCTTCAATTGGAAATTCAGTTATAAGATTGAAAGCTCCACCCTCCGTTGCATCTTATCCTCGGAACAACCAAGCTTCTCTGAGTTCTATTCATATTCCTTCTTCAACGCCTCTGAAGTTTAATGACAATCTGGTGACTGCGCAATTCATCCATGGGAATGCTGAGCCACCGAAGGAAATGTTCAATTATGATGTTCAGTTATCGCCTATTGGAAGAGGGAGTATGCCGAAAGGAAACTTTCAATTTGTCCATGGGAGTGCTGAGCCACCCAAGGAAATGTTCAACTATGATCAGTTACAGCCTAGTGGAAGAGGGAGTATGCCAAAAGGAAACTGTCAATTTGTCCATGGGAATGCTGCGCCACCCAAGGAACTGTTCAATTATGGTGTTCAGTTACTGCCTAGTGGAAGAGGGAGTGTGCCGAAAGGAAACTATCATAATAAGCAGCCCTTTCACCTATCCGAGCCTCCCGTGTTAAACAATGAATCTGATGTAATTCGGCTCCGTCCAACAGACAGGGTTATCCATGGGGTCGAGAATATGCTTTTCAATAGAGAGAATCCTGAACCAGCTGTCGTTGAGAGAGTGAAACAGACTCTTCAGGAGCAAGAAAGAGATTTACTTGAAGCAATCCGTAAACTGGAGAATGCATTAGAAGATGATGACGGGGCGCTGCAAAATCTTCAAAACCACACTCGGGGAGGACAAGGGATGGTCCGTGGCAATATCAGTGGATTTTGA 1071 0.4323 MTDLLSSLITDPNGSRGVVNMEQHIHCMEILAYSSLLKAFIAQSELLTWGKEELLTEIRKELHIADFEHGEILTKINSDETIKRLREQRKMASHSHDQAYNNANTTGRPSASIGNSVIRLKAPPSVASYPRNNQASLSSIHIPSSTPLKFNDNLVTAQFIHGNAEPPKEMFNYDVQLSPIGRGSMPKGNFQFVHGSAEPPKEMFNYDQLQPSGRGSMPKGNCQFVHGNAAPPKELFNYGVQLLPSGRGSVPKGNYHNKQPFHLSEPPVLNNESDVIRLRPTDRVIHGVENMLFNRENPEPAVVERVKQTLQEQERDLLEAIRKLENALEDDDGALQNLQNHTRGGQGMVRGNISGF 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03060 356 SMART ENT_2 21 94 IPR005491 -
Tsu07g03060 356 ProSiteProfiles EMSY N-terminal (ENT) domain profile. 21 111 IPR005491 -
Tsu07g03060 356 PANTHER OS10G0436850 PROTEIN 2 193 - -
Tsu07g03060 356 PANTHER PROTEIN EMSY-LIKE 4 224 336 IPR033485 GO:0050832
Tsu07g03060 356 Gene3D ENT domain 18 141 IPR036142 -
Tsu07g03060 356 Pfam ENT domain 23 89 IPR005491 -
Tsu07g03060 356 MobiDBLite consensus disorder prediction 95 112 - -
Tsu07g03060 356 MobiDBLite consensus disorder prediction 92 112 - -
Tsu07g03060 356 Coils Coil 303 341 - -
Tsu07g03060 356 SUPERFAMILY ENT-like 20 107 IPR036142 -
Tsu07g03060 356 PANTHER OS10G0436850 PROTEIN 224 336 - -
Tsu07g03060 356 PANTHER PROTEIN EMSY-LIKE 4 2 193 IPR033485 GO:0050832
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03060 Tsu-Chr7 36462686 36466301 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03060 - - ccaj:109802952 202.216