Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03055 ATGTATCTCCCCCGCCACATACTCATCAGAACCTTCATCCACCGCCGACCCTTCTCCCATTCCGCCGCCGCTATCCTCCAACCTCCAGAGCCAGACCTAGAGCCATTCACCTACCTCCCAGGCTTTCCAAAACCCAACCCTAAGTACGACGAAACAATCCTCGCGATTCCCCGCAAAGATTCCGGTAAGAACATTTCTGCCAAGGAGCGCAAAGTCGGTCGCGTTCCGAGCATCGTCTTCGAACAGGAAGACGGTCAGCATGGCGGTAACAAACGCCTCATTTCTGTCCGCTCCGATCAGATCAGGAAACTCGTTAACCATCTCGGACGCTCCTTTTTCCTTTCTCGTCTCTTCAACCTCCAAGTCCTTCACCAATTCGAATCCGATTCGAACTCCAACGACGAAGATGTCATCGAAAACGTCCGCGTTCTGCCCCGCAGTATTCATTTGAAAGCTGGCACAGATGCGCCTCTGAATGTTACATTTATAAGGGCTCCATCAGAAGCTTGGTTGAAAGTTGATATTCCTATTGTATTCAGAGGAGATGATATATCCCCTGGACTCAAGAAAGGTGCTTCTTTGAATACCATCAAAAGGACTGTTAAGTACCTATGCCCTGCAGACATTATTCCCCCGTATATTGACGTGGATTTAAGTGAGTTGGATGTGGGCCAGAAGATACTCATGGGCGATCTCAATGTTCATCCTGCATTAAAACTTCTTCACTCAAAAGATGAAGCTGTTTGTAAAATTATGGGCCAAAGGGTTTCTGAAACACAACCAAAGAAAACCAAGTAA 798 0.4749 MYLPRHILIRTFIHRRPFSHSAAAILQPPEPDLEPFTYLPGFPKPNPKYDETILAIPRKDSGKNISAKERKVGRVPSIVFEQEDGQHGGNKRLISVRSDQIRKLVNHLGRSFFLSRLFNLQVLHQFESDSNSNDEDVIENVRVLPRSIHLKAGTDAPLNVTFIRAPSEAWLKVDIPIVFRGDDISPGLKKGASLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKILMGDLNVHPALKLLHSKDEAVCKIMGQRVSETQPKKTK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03055 265 CDD Ribosomal_L25_TL5_CTC 52 164 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Tsu07g03055 265 Pfam Ribosomal L25p family 55 162 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Tsu07g03055 265 Gene3D Ribosomal Protein L25; Chain P 52 165 IPR020056 -
Tsu07g03055 265 PANTHER BNAA01G13300D PROTEIN 10 264 - -
Tsu07g03055 265 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 10 264 - -
Tsu07g03055 265 Pfam Ribosomal protein TL5, C-terminal domain 172 253 IPR020057 -
Tsu07g03055 265 Gene3D Ribosomal protein L25, beta domain 169 260 IPR037121 -
Tsu07g03055 265 SUPERFAMILY Ribosomal protein L25-like 57 253 IPR011035 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03055 Tsu-Chr7 36400845 36404467 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03055 K02897 - gmx:100809143 415.231