Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03041 AtgaggctgaaaccacttgatggcAGAACTGACCTCTTGTGGGCTGCATATttgtgCTACTCCTTACGAAGAAGAAGCGTCGAAGATTCACAGAGAACACTAGTAGTCTACTACACTAACACCGTAAGAAAAATGGCATCACATATTGTTGGATACCCACGTATGGGACCTAAGAGAGAGTTGAAATTTGCTTTGGAGTCATTTTGGGATGGTAAGAGCAGTGCTGAGGATTTGAAGAAGGTGGCTGCTGATCTACGAGCATCAATCTGGAAACAGCAGTCTGAAGCTGGGATCAAGTATATTCCAAGCAACACTTTCTCTTACTATGATCAGGTACTTGATACCACCGCCACCCTCGGCGCTGTTCCTCCAAGGTATGGCTGGACCGGCGGTGAGATTGGATTCGATACTTACTTCTCAATGGCCAGAGGTAATGCTACCTTGCCTGCTATGGAGATGACCAAGTGGTTTGACACCAACTACCACTTTATTGTCCCAGAATTGGGCCCTGAAGTTAACTTTGCTTATTCTTCTCACAAGGCTGTTGAAGAATACAAGGAAGCCAAGGCGCTTGGAGTAGACACTGTTCCCGTTCTTGTTGGCCCTGTATCCTACTTGTTGCTCTCCAAGGCCGCCAAGGGAGTTGACAAATCCTTTTCTCTCCTATCTCTGCTTCCCAAAGTCCTTGCTGTCTACAAGGAGGTTATTGCTGATCTCAAGGCAGCTGGTGCTCAATTCATTCAGTTTGATGAACCCACACTTGTCTTGGATCTTGAATCTCACAAGTTGCAAGCATTTACTGATGCATACGAACAACTTGCACCTGCTTTTGAAGGCCTGCATGTTCTTGTTGAAACCTACTTTGCTGATGTTCCTGCCGAGAATTACAAGACCCTCACATCCTTGGCTGGTGTTGCCGCATACGGATTTGATTTAGTCCGTGGAACTAAGACTCTTGATTTGATCAAGGCTGGATTTCCCAGTGGCAAATGGATCTTTGCTGGTGTGGTTGATGGAAGGAACATTTGGGCAAATGATCTTGCTGCTTCTCTCAGTACATTAGAGGCTCTTGCTGGCATCGTTGGCAAAGAGAGAATTGTTGTATCTACCTCCTCATCACTCCTTCACACTGCTGTGGATCTTGTTAACGAGACAAAGTTGGATGATGAAATTAAGTCATGGTTAGCTTTTGCTGCCCAAAAGGTTGTTGAAGTAAATGCATTGGCTAATGCATTGGTTGGCAACAAGGATGAGGCCTTCTTCGCTGCTAATGCTGCAGCTCAGTCTTCAAGAAAGACCTCTCCAAGAGTGACTAATGAAGCTGTTCAGAAGGCTGCTGCTGCATTGAAGGGTTCTGACCATCGCCGTGCTACTAACGTCAGTGCCAGGTTGGATGCTCAACAAAAGAAGCTTAATCTTCCAATCCTCCCAACCACCACTATTGGATCATTCCCTCAAACCGTTGAACTGAGGAGGGTTCGCCGTGAATTCAAGGCTAAGAAGATCTCTGAGGAAGAGTACATCAAGGCAATTAAGGAAGAAATCCGTAAAGTTGTTGAACTTCAAGAAGAGCTTGATATTGATGTCCTAGTACATGGAGAGCCTGAGAGGAACGATATGGTTGAGTACTTTGGTGAGCAATTGTCAGGCTTTGCCTTTACTGCTAATGGGTGGGTGCAATCCTATGGATCTCGTTGTGTCAAGCCACCAATCATCTACGGTGATGTGAGCCGCCCAAAGGCAATGACAGTCTTCTGGTCAGCTCTTGCCCAGAGTTTCACCAAGCGTCCAATGAAGGGAATGCTTACTGGCCCTGTCACTATTCTCAACTGGTCCTTCGTTAGAGTTGACCAACCTAGATCTGAGACCTGCTATCAGATTGCATTGGCTATTAAGGATGAAGTAGAAGACCTTGAGAAAGGTGGTATTGGTGTTATCCAGATTGATGAGGCTGCTTTGAGAGAGGGACTACCATTGAGGAAGTCCGAGCATGCTCACTACTTGGACTGGGCTGTCCACTCCTTCAGAATCACCAATGTTGGTGTTCAAGATACCACTCAGATCCACACTCACATGTGCTACTCTAACTTCAATGACATCATTCATTCAATCATTGACATGGATGCTGATGTTATCACCATTGAGAACTCCCGTTCTGATGAAAAGCTTTTGTCAGTCTTCCGCGAAGGTGTTGTGTATGGTGCTGGAATTGGCCCTGGTGTGTATGACATTCACTCCCCAAGAATCCCATCAACTGAAGAGATTGCCGACAGGATCAACAAGATGCTTGCAGTGCTTGAGAAGAACATTTTGTGGGTCAACCCTGACTGTGGGCTAAAAACCCGCAAGTACACAGAGGTTAAGCCCGCGCTCCTGAACTTGGTTGCTGCAGCCAAACAAATCCGTAATGAGCTTGCCAAGTGA 2424 0.4554 MRLKPLDGRTDLLWAAYLCYSLRRRSVEDSQRTLVVYYTNTVRKMASHIVGYPRMGPKRELKFALESFWDGKSSAEDLKKVAADLRASIWKQQSEAGIKYIPSNTFSYYDQVLDTTATLGAVPPRYGWTGGEIGFDTYFSMARGNATLPAMEMTKWFDTNYHFIVPELGPEVNFAYSSHKAVEEYKEAKALGVDTVPVLVGPVSYLLLSKAAKGVDKSFSLLSLLPKVLAVYKEVIADLKAAGAQFIQFDEPTLVLDLESHKLQAFTDAYEQLAPAFEGLHVLVETYFADVPAENYKTLTSLAGVAAYGFDLVRGTKTLDLIKAGFPSGKWIFAGVVDGRNIWANDLAASLSTLEALAGIVGKERIVVSTSSSLLHTAVDLVNETKLDDEIKSWLAFAAQKVVEVNALANALVGNKDEAFFAANAAAQSSRKTSPRVTNEAVQKAAAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTVELRRVRREFKAKKISEEEYIKAIKEEIRKVVELQEELDIDVLVHGEPERNDMVEYFGEQLSGFAFTANGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSALAQSFTKRPMKGMLTGPVTILNWSFVRVDQPRSETCYQIALAIKDEVEDLEKGGIGVIQIDEAALREGLPLRKSEHAHYLDWAVHSFRITNVGVQDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVVYGAGIGPGVYDIHSPRIPSTEEIADRINKMLAVLEKNILWVNPDCGLKTRKYTEVKPALLNLVAAAKQIRNELAK 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03041 807 CDD CIMS_N_terminal_like 47 411 - -
Tsu07g03041 807 CDD CIMS_C_terminal_like 477 799 IPR002629 GO:0003871|GO:0008270|GO:0009086
Tsu07g03041 807 Gene3D - 434 802 IPR038071 -
Tsu07g03041 807 Coils Coil 504 524 - -
Tsu07g03041 807 PIRSF Met_synth_MetE 44 807 IPR006276 GO:0003871|GO:0008270|GO:0009086
Tsu07g03041 807 PANTHER 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE METHYLTRANSFERASE 45 807 - -
Tsu07g03041 807 PANTHER COBALAMIN-INDEPENDENT METHIONINE SYNTHASE 45 807 - -
Tsu07g03041 807 Gene3D - 49 569 IPR038071 -
Tsu07g03041 807 SUPERFAMILY UROD/MetE-like 47 439 IPR038071 -
Tsu07g03041 807 TIGRFAM met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 50 804 IPR006276 GO:0003871|GO:0008270|GO:0009086
Tsu07g03041 807 Pfam Cobalamin-independent synthase, N-terminal domain 47 359 IPR013215 GO:0003871|GO:0008270|GO:0008652
Tsu07g03041 807 Pfam Cobalamin-independent synthase, Catalytic domain 476 799 IPR002629 GO:0003871|GO:0008270|GO:0009086
Tsu07g03041 807 Hamap 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 45 804 IPR006276 GO:0003871|GO:0008270|GO:0009086
Tsu07g03041 807 SUPERFAMILY UROD/MetE-like 441 803 IPR038071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03041 Tsu-Chr7 36189295 36195667 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03041 K00549 - gmx:100802039 1367.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03041 07 36189295 36195667 Tsu07g03041 07 36189295 36195667 ECH