Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03040 ATGGGGGAACAAACCACAGAAAAATCACGCCGAGAACGAAGGAAAGAATCCCGTTTGGCAAAGAAAACATCCAAATACCAATCTTGGCTTCAACACCAGaaATCTGAACCTATAAAAAGATTTACCAGTCAAAATCCAGAGTTAAAATCTGAAAGCGAATTGGACCAATCGGTTGGTCCTAGTCTCAATGAAACACAAGttgtgaagaaattgaaatCTTCGTCTAAGAAACAAGTGGAAGCTGAAGAACGTGCCTTGTCAGAAGATGAAACTAGTGGCCCTGTTGTAAGGAAAGTGAAAACGAGTTCTAAAACAAGTTCCAAGAAGAAGAGGCTTGACATGGGTGTGTCGGAGATTTCGTTCGCTGCCCAAAAGGATTTAGAGCTGGAAAGAAAACTCTCCAAGAGGCTTAAGGTGAAAGAAGGAAAATTGGGGGGATTGGATGATGGATTGAACTTGTTATTTGAAGGATTGCCGTCTGGTGATGATTTATTTGGAGATATGGAGGTTCTTGATACTGATGAGTTACCAAAAAAGAAGTCGAAGAAGAGCTCATCGAGTAAGAAGCAGAAGTTGTCAAAGAAAGGGCCTTTATCAATAACTTGTTGCTTCTATGAAATAAAAACAGATACGTTTCTCTGGAGTTTTAATAGACACTTCTATGATGTAATCTCTTTGCAGTCTGTTCCTCGTAGTGTTGCTTCACAGATTATGATTGAGGAGACCTTAGCATCATGTTCTGGAGGCCCCCGTGGCAATAAACAATATGCTGCTGTGTTTGGTGCATTTGTTGCAGGGATGGCCTGCTTGGTTGGTATGGACTTCGGTGCAAAGTTTATGGCTTCCTTTGCCAAATGCTTTGAGGATGAGTATCATAAACAAGACAATCTCTCCTTGAGGAATATTGCTCTTCTCTTATCCTATTTATGTATATTTGGAGTCTGTTCTAGtGATTTAATATTTGACTTTCTAATCATGCTGAGCAAGCATTTGACCGAGGTCGATGTCTCTATTATTTTGACTGTGTTACAAAGTTGTGGGATGAAAATAAGGGCTGATGATCCAACTGCCATGAAAACATTCATTCTTAATGTTCAGGATACGTCAAATAAGTTGAAGGCTTCCTCTGGAGATGTCCCTGAAAAGAATAACAGCAAAAGAATGGAGTTCATGCTTGAAACCATATATGATATCAAGAACAACAAGAAAAAGACAGAAGAGGTTAACCCCCGAATTAAAAAGTGGCTACAGAAGGTCCCTTTTTTTAATCCCTGTTTTATGGCAGTTTTATTATTCAAGCTCCTTTCTGCAAAGATATTACGTGTTATGTTCCACTGCCTTCCGTCGTGTGATATAATTTTTGTTCATGTACTTCAGGACAGAGATATAATGCGGGTTCTTGTGGAATGTTGCTTGCAAGAGAAAGTTTTTAACAAGTACTATACAGTGCTGGCTTCCAAATTGTGTGAGCATGACAAAAATCACAAGTTTACTCTGCAGTTTTGCTTATGGGACCACTTTAAGGAGCTGGAGTCTATGGCTCTTTTGAGATCAATGCACCTGGCAAAGTTTGTGGCTGAAATGGCTGCATCTTTTACTCTCTCCCTTACAGTTTTGAAGACTGTGGATCTGAGTGATATCACCCAACTAACCCCAAAAAGGATTATGCATTTCCGCATCCTGTTTGAGGCCATTTTCGATTATCCTGACTCCGTGGTGTGGAAAATATTCACGCGTATAGCAGGGACCCCTGAACTTGAAAGTTTTAGACAAGGCATCGAGTTTTTCGTTAAGGAATAcattttgaaaacaaataaagCTGTATCTCAAAAATTTAAGTTGGCAAAAAGAGCCCTTAATAATATCGAAGGAGTCCTGATGCAAGAGTAA 1890 0.3905 MGEQTTEKSRRERRKESRLAKKTSKYQSWLQHQKSEPIKRFTSQNPELKSESELDQSVGPSLNETQVVKKLKSSSKKQVEAEERALSEDETSGPVVRKVKTSSKTSSKKKRLDMGVSEISFAAQKDLELERKLSKRLKVKEGKLGGLDDGLNLLFEGLPSGDDLFGDMEVLDTDELPKKKSKKSSSSKKQKLSKKGPLSITCCFYEIKTDTFLWSFNRHFYDVISLQSVPRSVASQIMIEETLASCSGGPRGNKQYAAVFGAFVAGMACLVGMDFGAKFMASFAKCFEDEYHKQDNLSLRNIALLLSYLCIFGVCSSDLIFDFLIMLSKHLTEVDVSIILTVLQSCGMKIRADDPTAMKTFILNVQDTSNKLKASSGDVPEKNNSKRMEFMLETIYDIKNNKKKTEEVNPRIKKWLQKVPFFNPCFMAVLLFKLLSAKILRVMFHCLPSCDIIFVHVLQDRDIMRVLVECCLQEKVFNKYYTVLASKLCEHDKNHKFTLQFCLWDHFKELESMALLRSMHLAKFVAEMAASFTLSLTVLKTVDLSDITQLTPKRIMHFRILFEAIFDYPDSVVWKIFTRIAGTPELESFRQGIEFFVKEYILKTNKAVSQKFKLAKRALNNIEGVLMQE 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03040 629 PANTHER NUCLEOLAR MIF4G DOMAIN-CONTAINING PROTEIN 1 227 419 - -
Tsu07g03040 629 PANTHER NUCLEOLAR MIF4G DOMAIN-CONTAINING PROTEIN 1 3 190 - -
Tsu07g03040 629 PANTHER CELL CYCLE CONTROL PROTEIN CWF22-RELATED 459 625 - -
Tsu07g03040 629 SUPERFAMILY ARM repeat 256 403 IPR016024 -
Tsu07g03040 629 ProSiteProfiles MI domain profile. 422 544 IPR003891 -
Tsu07g03040 629 MobiDBLite consensus disorder prediction 70 95 - -
Tsu07g03040 629 MobiDBLite consensus disorder prediction 1 109 - -
Tsu07g03040 629 PANTHER CELL CYCLE CONTROL PROTEIN CWF22-RELATED 227 419 - -
Tsu07g03040 629 PANTHER CELL CYCLE CONTROL PROTEIN CWF22-RELATED 3 190 - -
Tsu07g03040 629 Gene3D - 176 421 - -
Tsu07g03040 629 Pfam MA3 domain 459 530 IPR003891 -
Tsu07g03040 629 MobiDBLite consensus disorder prediction 23 69 - -
Tsu07g03040 629 PANTHER NUCLEOLAR MIF4G DOMAIN-CONTAINING PROTEIN 1 459 625 - -
Tsu07g03040 629 Pfam MIF4G domain 263 402 IPR003890 GO:0003723|GO:0005515
Tsu07g03040 629 MobiDBLite consensus disorder prediction 1 22 - -
Tsu07g03040 629 SMART if4_15 193 402 IPR003890 GO:0003723|GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03040 Tsu-Chr7 36178905 36188368 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03040 K17583 - qsu:112012534 476.478