Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03028 ATGCAGACAACAAGAACGGTTCAAGTGAAGCAACTTTCAGATCTAGCTACTGAAAGGGAGATTCATgaattcttctcattttctgGTGAAATTGAACATATTCAGATCGTTAGAGAATATGGGAAACCAAAGACTGCATTTGTGACATTTAAAGATCCTAAAGCGCTTGAAATCGCGTTATTGTTATCGGGAGCAACAATAGTAGATCAGATTGTGAGTATAAGTCCGGCTGACAACTATGTTGCAAATCATGAGATGCAGGAAGAAAGGGTGGTGGAATATGCTATAAATGTTGCTCCTGAAGATGCCGCCTCGAATACTGAGGAGGAGAAACCCGGTGGAAGAGTATATCTTAGTAAAGCACAAGATGTAGTTACAAGTATGCTGGCAAAAGGATCAGCGATAAGACAAGATGCCGTGAACAAAGCTAAAGCATTTGATGAGAAGCATCAGTTGACTGCCAATGCATCGGCAAAGGTCAGTTCTTTTGACAAGAGAGTTGGACTGACAGAGAAATTGACAGTTGGACTTTCTGTAGTGAATGAGAAAGTGAAATCTGTGGATCAGAGGCTACATGTTTCAGATAAAACAATGGCAGCAATATTTGCAGCCGAGAGGAAGTTGAACGATACTGGATCAGCTGTCAAAACAAGCAGATATGTGACTGCCGGAACATCATGGTTAACTGGTGCTTTTAGCAAAGTGGCAAAAGCCGGAAACGTTGCTGGAACTAAAACTAGAGAAAAGTTTAATATGGCCGTTTCAAACTTGACAACAAAGGAAACCACAATGGTTGTATAG 801 0.4007 MQTTRTVQVKQLSDLATEREIHEFFSFSGEIEHIQIVREYGKPKTAFVTFKDPKALEIALLLSGATIVDQIVSISPADNYVANHEMQEERVVEYAINVAPEDAASNTEEEKPGGRVYLSKAQDVVTSMLAKGSAIRQDAVNKAKAFDEKHQLTANASAKVSSFDKRVGLTEKLTVGLSVVNEKVKSVDQRLHVSDKTMAAIFAAERKLNDTGSAVKTSRYVTAGTSWLTGAFSKVAKAGNVAGTKTREKFNMAVSNLTTKETTMVV 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03028 266 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 67 IPR000504 GO:0003723
Tsu07g03028 266 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 5 79 IPR000504 GO:0003723
Tsu07g03028 266 SMART rrm1_1 6 75 IPR000504 GO:0003723
Tsu07g03028 266 SUPERFAMILY RNA-binding domain, RBD 3 82 IPR035979 GO:0003676
Tsu07g03028 266 Gene3D - 1 93 IPR012677 -
Tsu07g03028 266 PANTHER RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN-RELATED 3 264 - -
Tsu07g03028 266 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 3 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03028 Tsu-Chr7 36080152 36083665 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03028 - - mnt:21397849 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03028 07 36080152 36083665 Tsu07g03028 07 36080152 36083665 ECH