Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03019 ATGGCAAAAATTCCCATATTTTTGGTGGGGTTTTGGATATTAAGTGATTGGGCTGGTTTATTAGAGACAGAAGATATGATGAAGTATAAGAACCCTAATGAGTCAGTTAATATTAGGGTTGAGGATCTTATTAGCAGAATGACTCTTGAGGAGAAAATTGGTCAAATGTTACAAATTGAGCGCAAATATGCATCTAATGGTGTGCTCAAAAAGTATTTTATAGGGAGTGTTCTGAGTGAGGGAGGGAGCATTCCAGCTCCAAAGGCTTCAGCTGAAAACTGGATTGATATGTTGAATGAATTTCAGAAGGATGCATTATCAACAAGGCTTGGAATTCCAATGTTTTATGGGATTGATGCTGTTCATGGTCACAGCTCTGTTTACAAAGCAACTATTTTTCCTCACAATATTGGCCTTGGAGCTACCAGGGACCCTGAACTAGTAAAGAGAATTGGAGCTGCAACTGCACTTGAAGTTAGAGCAACAGGAATTCAGTATGTTTATGCACCTTGTGTAGCAGTCTGTAGAGATCCAAGATGGGGTCGGTGTTATGAAAGCTACAGTGAAGATCCTAAAGTAGTTCAAGCTATGACTGAACTCATATCAGGATTGCAAGGAGACATCCCTGATAATATGCCAAATGGTGTTCCATTTATCGCTGGAAAAGAAAAGGTTATAGGTTGTGCTAAGCACTACGTTGGTGACGGTGGAACAACCAATGGGATTGATGAGAGTAACACTGTTATAGATAGAGATGAAATGATGCGAATTCACATGCCAGGCTACTATAGTTCCATCAGCAAGGGTGTGGCAACCATTATGGTATCTTACTCGAGTTGGAACGGCGTTAAAATGCATGCTAACCATGACCTAGTAACTGGCTACCTCAAAAATACTCTCCAATTTCAGGGCTTTGTTATTTCAGATTTTGAGGGTATTGATAGGATCACTTCTCCATTTCGTGCAAACTGCACTTATTCGGTTCTAGCAGGAGTTTCTGCTGGCATTGACATGTTCATGGTTCCGAAGTTCTACAACGAATTCATTGATGAGCTAACAATGTTGGTGAAAAATGAGTTCATTCCAATGAGTCGAATTGATGATGCAGTGAGAAGAATTTTGCGGGTTAAATTCATGATGGGTATTTTTGAGAACCCTTTTGCTGATTACAGTTTGGTCAAATATCTTGGGTTTAAGGAGCATAGAGAACTGGCTAGGGAAGCTGTAAGGAAATCCATGGTCCTTCTAAAAAATGGTAAGTCTGCTGAGAAGCCTCTATTACCTCTTCCTAAAAAGGTTCCGAAAATACTTGTGGCTGGGAGCCATGCAAATAATCTAGGATATCAGTGTGGTGGCTGGACCGTTGAATGGCAAGGAATCAGTGGTAACGATAATCTCGAAGGGACTACGATTCTCACTGCCGTGAAAAACACTGTTGATTCAGAGACCATAGTGATCTACGAGGAGAATCCTGATATAGAGTTTGTTGAATCCAATGAATTTTCCTATGCCATAGTTGTAGTAGGAGAGCATCCTTATGCTGAAATGCATGGTGACAACATGAACTTGACAATCCCCAACCCTGGTCCCGAGACCATAACAAATGTTTGTGGAGCTATAAAATGTGTGGTTATCATTATTTCGGGACGCCCTTTAGTTATCGAACCGTATATTGGTTTGATAGATGCAGTTGTTGCCGGTTGGTTACCAGGTAGTGAAGGACAAGGTGTAGCTGATGTTTTATTTGGTGACTATGGTTTTACAGGAAAGCTTCCAAGAACATGGTTCAAAAGTGTTGATCAACTTCCAATGAATGTTGGTGATCCTCATTATGATCCCCTTTTCCCATTTGGGTTTGGTCTTTCTACCAAACCTACTAAAGCTATTTACTCTCAGTAG 1899 0.4055 MAKIPIFLVGFWILSDWAGLLETEDMMKYKNPNESVNIRVEDLISRMTLEEKIGQMLQIERKYASNGVLKKYFIGSVLSEGGSIPAPKASAENWIDMLNEFQKDALSTRLGIPMFYGIDAVHGHSSVYKATIFPHNIGLGATRDPELVKRIGAATALEVRATGIQYVYAPCVAVCRDPRWGRCYESYSEDPKVVQAMTELISGLQGDIPDNMPNGVPFIAGKEKVIGCAKHYVGDGGTTNGIDESNTVIDRDEMMRIHMPGYYSSISKGVATIMVSYSSWNGVKMHANHDLVTGYLKNTLQFQGFVISDFEGIDRITSPFRANCTYSVLAGVSAGIDMFMVPKFYNEFIDELTMLVKNEFIPMSRIDDAVRRILRVKFMMGIFENPFADYSLVKYLGFKEHRELAREAVRKSMVLLKNGKSAEKPLLPLPKKVPKILVAGSHANNLGYQCGGWTVEWQGISGNDNLEGTTILTAVKNTVDSETIVIYEENPDIEFVESNEFSYAIVVVGEHPYAEMHGDNMNLTIPNPGPETITNVCGAIKCVVIIISGRPLVIEPYIGLIDAVVAGWLPGSEGQGVADVLFGDYGFTGKLPRTWFKSVDQLPMNVGDPHYDPLFPFGFGLSTKPTKAIYSQ 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03019 632 Gene3D - 22 397 IPR036962 GO:0004553|GO:0005975
Tsu07g03019 632 SUPERFAMILY (Trans)glycosidases 26 412 IPR017853 -
Tsu07g03019 632 Pfam Glycosyl hydrolase family 3 N terminal domain 48 376 IPR001764 GO:0004553|GO:0005975
Tsu07g03019 632 Gene3D - 398 624 IPR036881 GO:0004553|GO:0005975
Tsu07g03019 632 Pfam Glycosyl hydrolase family 3 C-terminal domain 413 622 IPR002772 GO:0004553|GO:0005975
Tsu07g03019 632 PANTHER BETA-D-GLUCOSIDE GLUCOHYDROLASE 5 632 - -
Tsu07g03019 632 PRINTS Glycosyl hydrolase family 3 signature 295 313 IPR001764 GO:0004553|GO:0005975
Tsu07g03019 632 PRINTS Glycosyl hydrolase family 3 signature 225 241 IPR001764 GO:0004553|GO:0005975
Tsu07g03019 632 PRINTS Glycosyl hydrolase family 3 signature 179 195 IPR001764 GO:0004553|GO:0005975
Tsu07g03019 632 PRINTS Glycosyl hydrolase family 3 signature 133 152 IPR001764 GO:0004553|GO:0005975
Tsu07g03019 632 PRINTS Glycosyl hydrolase family 3 signature 109 125 IPR001764 GO:0004553|GO:0005975
Tsu07g03019 632 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 5 632 - -
Tsu07g03019 632 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 413 622 IPR036881 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03019 Tsu-Chr7 35910824 35915184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g03019 24 627 Glycoside Hydrolase AT5G20950 70.199 0.0 877
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03019 K05349 - gmx:100816705 1099.73