Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g03007 ATGGCGGCGAACGATCCAAACCACCAAACTCAGATGGCGTTAATTCTCAGCCAAGATTCAACTCACTTCGAATCCCTAATTACAAATCTCATGTCAACCTCCAACGACCACCGTTCCCAAGCCGAAAATCTCTTCAATTTATGCAAACAAACTTATCCCGATTCCTTAATTCTCAAACTCGCTCAACTTCTCCACACTTCCCCTAACGAACAAACACGAACCATGTCCACTATCCTCCTCCGCCGTCATCTCACGCGCCACCATGACGATTCCTTTATCTATCCGCGTCTTTCTCCTTCCACTCAAACCACCCTCCGTTCTCTTCTCCTTTCGTCTCTCCACAAAGAACCTGTCAAATCCATCGCTAAGAAGCTATGTGATACTGTTTCTGAACTTGCGTCCGCTCTTCTTCCCGATGATATGTCTTCTTGGCCGGACTTGCTTCCTCTTCTTTTCCAGTGGGTTACTTCGTCTGACCCTAGGCTTCAGGAAATTTCGCTGATTATATTCGCTCAATTGGCTCATTATATTGGTGAAACCCTACTTCCTCAATTGTCCACTCTTCACTCTGTTTTCCTTCGGTGTCTTGGCGCCGCCACTTCTTCTGATGTTCGCATCGCTGCCCTTGCTGCCAGTGTCAACTTTGTCCAGTGCCTTTCCAATCCCTCTGACCGTGACAGGTTTCAGGATTTGCTGCCACTCATGATGCAGACATTGACTGAGGCATTGAATTCTGGTCAGGAGGCTACTGCGCAGGAGGCCCTTGAGCTCCTCATTGAGCTTGCTGGTACTGAGCCACGTTTCCTAAGAAGGCAGCTCGTTGATGTTGTCGGTGCCATGCTGCAGATTGCTGAGGCCGAGTCTTTAGAAGAAGGGACTCGCCATTTGGCTATTGAGTTTGTTGTTACACTTGCTGAGGCTAGGGAGCGTGCTCCTGGCATGATGAGGAAGTTGCCGCAGTTTGTGAAGAAGTTGTTTGGTGTGCTTCTGAACTTGTTGCTGGATATTGAAGATGATCCTGCTTGGCATGCTGCAGTGACTGAGGATGAGGATGCTGGTGAGACTACTAACTTTGGATTTGGACAGGAATGTTTGGACAGACTTTCAATTTCTTTGGGTGGGAACACGATTGTGCCTGTTGCATCTGAGTTGTTTCCGACTTACTTGGCTGCCCCTGAATGGCAAAAGCACCATGCTGCGCTCGTTGCCATTGCACAAATTGCAGAGGGTTGTTCAAAGGTGATGACAAAGAATCTGGAACATGTATTATCAATGGTTTTGAATTCATTTTCTGACCAACACCCTAGGGTGCGATGGGCGGCTATAAACGCAATTGGGCAGTTGTCCACAGATTTAGGGCCAGACTTGCAAAATAAATATCACCACTTAGTGCTTCCGGCATTAGCTGGTGCCATGGATGATTTTCAAAATCCTCGAGTACAGGCTCATGCTGCTTCTGCAGTGTTAAACTTCACTGAGAATTGCACCCCCGATATTCTAATACCTTATTTGGATGGGATTGTGAGCAAACTTCTTGTACTCCTTCAgGGTGGAAAGCAAATGGTTCAAGAAGGCGCTTTGACAGCTTTAGCATCAGTTGCTGATTCTTCACAGGAGAAATTTGAGAAGTATTATGATGTTGTGATTCCATACCTAAAAGCTATTTTGTTGAATGCAAATGACAAATCCAATCGTATGCTTCGTGCCAAAGCAATGGAGTGTATTAGTTTGGTAGGAATGGCTGTTGGAAAGGCCAAGTTCAGGGATGATGCCAAACAgGTCATGGATGTCTTGATGTCACTGCAACAATCTCAACTGGATGCTGATGATCCAACCGCGAGTTACATGTTACAAGCATGGGCACGACTTTGCAAGTGTCTCGGACAAGATTTTCTCCCATACATGGGTTTTGTCATGCCTCCCTTGCTCCAGTCTGCACAACTTAAGCCTGACGTGTCAATTACATCAACAGATGCTGATGCTgaatttgatgaagatgatgacagCATTGAAACCATTACTCTCGGAGATAAAAGAATAGGCATTAAGACCAGTGTTCTGGAGGAGAAGGCTACAGCATGCAACATGTTATGTTGCTATGCTGATGAGTTGAAGGAAGGCTTTTTTCCTTGGATTGACCAGGTTGCTTCCACATTGGTTCCTCTTCTTAAATTTTACTTCCATGAAGAAGTTAGGAAGGCAGCAGCTTCAGCTATGCCAGAACTGTTGACTTCAGCAAAATTAGCAATAGAGAAGGGGCAGTCACAAGGCCGTGATGCAGCTTACCTAAAACAATTGTCCGATTATATAATTCCAAATTTGGTGGAAGCTTTACATAAGGAACCAGAGGTAGAAATTTGTGCAAGCATGTTGGACGCACTGAATGAATGCATACAGGTCTCAGGACCACATCTAGATGAAAAACAAGTAAGGAGCATTGTTGACGAGATTAAACAAGTCATCATGGCCAGTTCATCCAGAAAGGATGAGAGAGCAGAGAGAGCCAAAGAAGAGGACTTTGATGCTGAAGAAAGAGAACTACTCAAAGAAGAAAATGAGCAAGAAGAAGAACTTTTCGATCAAATTGGTGATTGTTTGGGGACGTTGATAAAAACATTCAGGGCATCTTTTTTGCCTTTCTTTGATGAGCTTTCGTCATTCCTAACACCTATGTTTGGTAAAGACAAAACCTCAGAAGAAAGGAGAATTGCCATTTGTATATTCGATGATGTTGCTGAGCACTGTCGTGAATCAGCTCTTAAATATTATGTTTCATTTCTTCCATTCTTGCTTGAAGCTTGCAATGATGAATGTTCAGATGTTCGACAGGCAGCTGTTTATGGTGTTGGTGTTTGTGCCGAGTTTGGTGGATCTGTTTTCAAACCCCTTGTTGGAGAGGCACTTTCAAGATTAAATGCTGTGATAACACATCCAAATGCACGGGATTCTGATAATGTTATGGCATATGATAATGCTGTTTCAGCCCTTGGAAAAATATGCCAGTTCCACCGCGATAGCATAAATGCAGCACAGGTTGTTCCGGCCTGGCTAAGTTGTTTGCCTATAAAAGGTGATTTAATTGAGGCTAAAGTTGTGCACGACCTACTTTGTTCAATGGTTGAAAGATCTGATAGAGAACTTATAGGTCAAAACAATCAGTATCTTCCCaagattattgtaatttttgCCGAGATATTATGTGCGGGGAATGATCTGGCAACTGAACAAACCGTGAGTCGGATGATTAATTTATTGAGGCAACTTCAACAGACTTTGCCGCCTTCTACCCTTGCTTCAACCTGGTCATCTTTGCACCCTCAGCAACAGCTTGCACTTCAGTCCATCCTATCATCCTAG 3357 0.4376 MAANDPNHQTQMALILSQDSTHFESLITNLMSTSNDHRSQAENLFNLCKQTYPDSLILKLAQLLHTSPNEQTRTMSTILLRRHLTRHHDDSFIYPRLSPSTQTTLRSLLLSSLHKEPVKSIAKKLCDTVSELASALLPDDMSSWPDLLPLLFQWVTSSDPRLQEISLIIFAQLAHYIGETLLPQLSTLHSVFLRCLGAATSSDVRIAALAASVNFVQCLSNPSDRDRFQDLLPLMMQTLTEALNSGQEATAQEALELLIELAGTEPRFLRRQLVDVVGAMLQIAEAESLEEGTRHLAIEFVVTLAEARERAPGMMRKLPQFVKKLFGVLLNLLLDIEDDPAWHAAVTEDEDAGETTNFGFGQECLDRLSISLGGNTIVPVASELFPTYLAAPEWQKHHAALVAIAQIAEGCSKVMTKNLEHVLSMVLNSFSDQHPRVRWAAINAIGQLSTDLGPDLQNKYHHLVLPALAGAMDDFQNPRVQAHAASAVLNFTENCTPDILIPYLDGIVSKLLVLLQGGKQMVQEGALTALASVADSSQEKFEKYYDVVIPYLKAILLNANDKSNRMLRAKAMECISLVGMAVGKAKFRDDAKQVMDVLMSLQQSQLDADDPTASYMLQAWARLCKCLGQDFLPYMGFVMPPLLQSAQLKPDVSITSTDADAEFDEDDDSIETITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIDQVASTLVPLLKFYFHEEVRKAAASAMPELLTSAKLAIEKGQSQGRDAAYLKQLSDYIIPNLVEALHKEPEVEICASMLDALNECIQVSGPHLDEKQVRSIVDEIKQVIMASSSRKDERAERAKEEDFDAEERELLKEENEQEEELFDQIGDCLGTLIKTFRASFLPFFDELSSFLTPMFGKDKTSEERRIAICIFDDVAEHCRESALKYYVSFLPFLLEACNDECSDVRQAAVYGVGVCAEFGGSVFKPLVGEALSRLNAVITHPNARDSDNVMAYDNAVSALGKICQFHRDSINAAQVVPAWLSCLPIKGDLIEAKVVHDLLCSMVERSDRELIGQNNQYLPKIIVIFAEILCAGNDLATEQTVSRMINLLRQLQQTLPPSTLASTWSSLHPQQQLALQSILSS 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g03007 1118 SUPERFAMILY ARM repeat 690 1093 IPR016024 -
Tsu07g03007 1118 SMART TOG_3 371 619 IPR034085 -
Tsu07g03007 1118 Pfam Importin repeat 6 787 889 IPR041389 -
Tsu07g03007 1118 PANTHER IMPORTIN BETA 13 1117 IPR040122 GO:0006606
Tsu07g03007 1118 PANTHER BNAC09G37860D PROTEIN 13 1117 - -
Tsu07g03007 1118 SUPERFAMILY ARM repeat 21 829 IPR016024 -
Tsu07g03007 1118 Coils Coil 833 857 - -
Tsu07g03007 1118 Pfam Importin repeat 288 379 IPR041653 -
Tsu07g03007 1118 Pfam HEAT repeat 423 449 IPR000357 GO:0005515
Tsu07g03007 1118 Pfam HEAT repeat 926 954 IPR000357 GO:0005515
Tsu07g03007 1118 Pfam Importin-beta N-terminal domain 52 113 IPR001494 GO:0006886|GO:0031267
Tsu07g03007 1118 Gene3D - 13 1117 IPR011989 -
Tsu07g03007 1118 ProSiteProfiles HEAT repeat profile. 422 460 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g03007 Tsu-Chr7 35742034 35750824 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g03007 K20222 - gmx:100797431 1857.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g03007 07 35742034 35750824 Tsu07g03007 07 35742034 35750824 ECH