Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02986 ATGGCAATTGCACGCACTGGAGTCTACGTTGATGACTATTTGGAGTATGCAAACACATTACCCGCTGAACTTCAGAGACTTCTCAACACCGTTCGTGAACTTGATGAACGATCCCAATCTATGATAAACCAAACAAGGCAGCAGACAAAGTACTGTATGGGGTTTTCATCTCATGGCTCTAAGAAGGGTAaccataatcataatcataataattataataacagTTACGTGAATGAGGACGATGATGCTTCCATTGAGAAAATGCGAAAAGAAATTGAAGCAAATCAGGATAGTGCATTGAGTTTATGCACTGAGAAGGTTTTGTTGGCGCGGCAAGCATATGAActgATAGATAGCCATGTAAAACGACTTGATGAGGATTTAAACAGCTTTGCTGAAGATTTAAAGCAAGaGGGGAAAATAGCACAAGATGAACCAGCCATTCTTCCCCCAATGCCTATTGTCCCTAAACCTGAAAAGCGCAGGCACGCATATGGTACACCTCAATCGAAGAGACTTGATTACAGGGAAAGAGACTGGGATAGAGACTTTGAGCTAATGCCTCCACCAGGAAGCCATAAGAAGGACTATCTGACCCCTATGGCTATGGATATTGATCAACCCATTGATCCAAATGAACCTACATACTGTGTTTGTCATCAGGTATCTTTTGGAGATATGATTGCTTGTGACAACGAAAATtgcCGAGGAGGTGAATGGTTCCACTATTCGTGTGTCGGCCTAACACAAGAGACAAGGTTCAAGGGAAAGTGGTATGGTTTGGAGAGAGGTAGATTGTGTGCGGGTGGTATGAGAAGGTCGACGTGGTGGAGGGAGTTTGTGCGTATCCGAGATGGTGGTGGTGAGCTCGAGGGAGGGTGGTTTAGGGAGAATATTATGAGGAAGGTGGGGACGGATAGttggcagtggcagcctgagTTGGATAGTGGCTACATTGTTCGCGGTGCTTATCAGCTTTTGACGGATCAGGTTGTGGCCCCTTTAGATGCTGCAGCAGGTCTTATATGGCACcctcaggttcctttgaaggtgtCCATTTTGGCGTGGCGACTCTTGCGTGATAGGTTACCCACTAAATCAAACCTAATCACTCGAGGTATCTTACCAATGGCGGCACACTTTTGTGTTTCTGGTTGCGAAGAGGCCGAATCAGCACATCACTTGTTTCTCTCTTGCAGCACTTTTGGCTCCCTTTGGCCTTTGGTTAGTTCTTGGACAGGTTCTTCTTTGGTGACAGTGCAAACTCTTCTAGATCATTTCGTCCAGTTTACTAGTTCGGCAGGTGGCTCTCGTGCTCGTCGCTCCTTCATGCAACTCCCATGGCTTGTCagcgtGGAAGAAAACAAAGAGTACCAGTTAAACTCTCACATGGAATGGAACAAAACAACTAACTTCAGTGTTCAGAACCGACTTTTTTGGCCAAGAGATGAGTAA 1455 0.4275 MAIARTGVYVDDYLEYANTLPAELQRLLNTVRELDERSQSMINQTRQQTKYCMGFSSHGSKKGNHNHNHNNYNNSYVNEDDDASIEKMRKEIEANQDSALSLCTEKVLLARQAYELIDSHVKRLDEDLNSFAEDLKQEGKIAQDEPAILPPMPIVPKPEKRRHAYGTPQSKRLDYRERDWDRDFELMPPPGSHKKDYLTPMAMDIDQPIDPNEPTYCVCHQVSFGDMIACDNENCRGGEWFHYSCVGLTQETRFKGKWYGLERGRLCAGGMRRSTWWREFVRIRDGGGELEGGWFRENIMRKVGTDSWQWQPELDSGYIVRGAYQLLTDQVVAPLDAAAGLIWHPQVPLKVSILAWRLLRDRLPTKSNLITRGILPMAAHFCVSGCEEAESAHHLFLSCSTFGSLWPLVSSWTGSSLVTVQTLLDHFVQFTSSAGGSRARRSFMQLPWLVSVEENKEYQLNSHMEWNKTTNFSVQNRLFWPRDE 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02986 484 Gene3D - 5 129 - -
Tsu07g02986 484 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 208 263 IPR013083 -
Tsu07g02986 484 Pfam Inhibitor of growth proteins N-terminal histone-binding 9 130 IPR024610 -
Tsu07g02986 484 Coils Coil 24 44 - -
Tsu07g02986 484 MobiDBLite consensus disorder prediction 148 167 - -
Tsu07g02986 484 SUPERFAMILY FYVE/PHD zinc finger 196 259 IPR011011 -
Tsu07g02986 484 Pfam zinc-binding in reverse transcriptase 318 406 IPR026960 -
Tsu07g02986 484 SMART PHD_3 216 264 IPR001965 -
Tsu07g02986 484 CDD PHD_ING 216 259 - -
Tsu07g02986 484 CDD ING_plant 19 128 - -
Tsu07g02986 484 PANTHER INHIBITOR OF GROWTH PROTEIN 2 260 IPR028651 -
Tsu07g02986 484 PANTHER PHD FINGER PROTEIN ING2 2 260 - -
Tsu07g02986 484 SMART ING_2 9 131 IPR024610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02986 Tsu-Chr7 35509954 35517312 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02986 K11346 - gmx:100787916 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02986 07 35509954 35517312 Tsu07g02986 07 35509954 35517312 ECH