Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02978 ATGGGTGCGAGTCGAAAGCTTCAAGGAGAGATAGATCGTGTTCTTAAGAAGGTTCAAGAAGGCGTTGAAGTCTTCGATAGTATCTGGAACAAGGTTTATGATACGGACAATGCAAATCAGAAGGAGAAATTTGAGGCAGACCTCAAAAAGGAGATTAAGAAGCTTCAGAGGTAtagagatcaaattaaaacttgGATTCAATCCAGTGAAATCAAGGATAAGAAGGTTAGTGCCTCGTATGAGCAAGCGCTGGTGGATGCTCGGAAGTTAATTGAACGAGAAATGGAAAGATTTAAGATATGTGAGAAGGAAACGAAGACCAAAGCATTTTCGAAAGAAGGCTTGGGTCAACAGCCTAAGACTGATCCGAGAGAGAAGGCTAAATCAGAAACAAGGGATTGGTTAAACAATGTGGTTGGAGAGTTAGAATCTCAGATTGATAACTTTGAAGCTGAGCTTGAAGGCCTTACAGTCAAGAAGGGAAAAAACAGGCCGCCTAGATTGACGCATCTGGAGACATCAATTACTCGGCATAAGGCTCATATAAAGAAATGTGAATTAGTTTTGAGGCTTTTAGATAATGACGAATTGAGTCCAGAGCAGGTTAATGATGTGAAAGATTTCTTGGATGACTATGTAGAGCGTAATCAGgAAGATTTTGACGagtttgatgatgttgatgaactATACATTTCATTACCTTTAGACAAGGTTGATACTCTGGAAGATCTTGTTACAATTCCCACAAGTGTTGCAGTAGCAAagACAATCAGTTCATTACCTTTAGACGAGGGGAAGACTCTAGAAGATCTTGTTACAATTCCCACTGGTCTTGCAAAGGTGCCACCTGGTCTTAGCTTAAAGAATCCTTTGGTAGCATCTGCATCACAGTCAGCATCATCACAAACATCTGAGCAAGCTGATGAGACAGCGTCTCAGGATAGCAATTCAGACATTGTGGCAAAAACTCCACCTCCTAAAAGTGGTGGAATTAGCCCTTCTACTTCAACACCTACTGGCAACCATGCTACTCCTGCCTCTGTGAATGTTTCAGCTCTTAACTTGTCGAGTGCACCGGCTGCTGCAGTCCTTCCTGGTTCAAATTCTGTTCGAAATGTCTTGGAGAATGCTATTGTAAATCAGTCTGCCTCtacaaaggaagaagaaattaacAACTTCCCTAGCCGTAGACCATCTCCATCGCTTTCTGATGTAGCTCTTGCGAGGGGCAGAAACAGCTTGTCAAATCAAGCAACAGCCAGCATGCCCCTTGGTTCTGGAAACATGGTTTCTAGTAATGGGGCCCCTAGTGCAGTCCCTTCAGCATCAGAAATAACTAAGCGAAACATATTGGGAGCTGATGATAGACTTGGAAGTAGTGGGATGGTGCAGCCTCTTGTATCCCCGCTAAGTAATAGATTGATCTTGCCTCAGGTTGGGAAGGCTAATGATGGACCCACCTCAGTTGACTCTGGTACTGTTAGTGAAGCTGCAGCTGTATCTGGAAGAGTTTTCTCCCCTTCTGTGGTTCCCGGCATGCAATGGAGACCTGGAAGTCCTTTTCAGAATCAGAATGATGCAGGGCAGGTTCGTGGAAGAACTGAAATAGCTCCTGATCAAAGGGAAAAGTTTTTGCAGAAGTTTCAGCAAGTGCAACAACAAGGGGCCAGTACCCTTCTTAATATGCCTTCCCTTGTCGGAGGAAACCACATGCAGTTTTCTTCGCAGCAACAAAATCCACTTTTGCAGCAGTTCAACTCTCAAGGCTCGTCTGTTTCTTCACAATCTGGTATGGGACTTGGTGCGCAATCCCCAAGCTTCAGTGGTATTTCGTCTGTCTCGGTACAACAGCCCAACTCTGTTCATTCCCCGTCCAGTCAACAGTCAATTCCCAGTTTTGCTAAAGATGCAGATAAAATTGAAGAACAGCAGCAACATCAGAATTTTCCTGATGAGTCAGCAATTGAATCTACTTCTAGCACAGGGATTGGCAAGAATCTCATAGTTGAAGATGATTTGAAATCGCCATATGTTGTAGATTCACCTGTAGGTGTATCTGCCTCTCTTCCAGAAGCTGCTCAAATTTCCAGAGATATTGATTTGTCTCCTGGCCAACCTTTACAATCCAATCAATCCACTGGTAACCTTGGTGTCATTGGAAGAAGAAATGGTGTTGAACTTGGAGCCATTGGCGATAGCTTTAGTGCATCAAGTGTTAGTTCTGGTGGAGTTCGTGATCAGCTATATAATTTACAGATGCTTGAGGCAGCACACTTCAAAATTCCACAAGCTAAAGACTCAGAACGTCCTAGAACCTACACTCCTAGGCACCCAGCAATTACACCTCCTTGCTATCCTCAAGTACAAGCGCCTATAGTTAACCATCCTGGCTTTTGGGAGAGATTAGGTCTTGAACCACAAGGCACTGATACCCTGTTCTTTGCATTTTATTATCAACAGAACACATACCAACAATATTTGGCTGCAAAGGAGCTGAAGAAGCAGTCTTGGAGATACCACCGAAAGTATAATACATGGTTTCAGCGGCATGAAGAGCCCAAAGTTGCTACTGATGAATATGAGCAGGGAACATATGTGTACTTTGATTTTCATATTGCAAATGATGATCCGAAACATGGATGGTGTCAAAGAATCAAGACTGAATTCACTTTTGAGTATAATTTCCTTGAAGATGAGCTTCTTGTATAG 2709 0.4219 MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPREKAKSETRDWLNNVVGELESQIDNFEAELEGLTVKKGKNRPPRLTHLETSITRHKAHIKKCELVLRLLDNDELSPEQVNDVKDFLDDYVERNQEDFDEFDDVDELYISLPLDKVDTLEDLVTIPTSVAVAKTISSLPLDEGKTLEDLVTIPTGLAKVPPGLSLKNPLVASASQSASSQTSEQADETASQDSNSDIVAKTPPPKSGGISPSTSTPTGNHATPASVNVSALNLSSAPAAAVLPGSNSVRNVLENAIVNQSASTKEEEINNFPSRRPSPSLSDVALARGRNSLSNQATASMPLGSGNMVSSNGAPSAVPSASEITKRNILGADDRLGSSGMVQPLVSPLSNRLILPQVGKANDGPTSVDSGTVSEAAAVSGRVFSPSVVPGMQWRPGSPFQNQNDAGQVRGRTEIAPDQREKFLQKFQQVQQQGASTLLNMPSLVGGNHMQFSSQQQNPLLQQFNSQGSSVSSQSGMGLGAQSPSFSGISSVSVQQPNSVHSPSSQQSIPSFAKDADKIEEQQQHQNFPDESAIESTSSTGIGKNLIVEDDLKSPYVVDSPVGVSASLPEAAQISRDIDLSPGQPLQSNQSTGNLGVIGRRNGVELGAIGDSFSASSVSSGGVRDQLYNLQMLEAAHFKIPQAKDSERPRTYTPRHPAITPPCYPQVQAPIVNHPGFWERLGLEPQGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEYEQGTYVYFDFHIANDDPKHGWCQRIKTEFTFEYNFLEDELLV 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02978 902 MobiDBLite consensus disorder prediction 382 403 - -
Tsu07g02978 902 Coils Coil 41 61 - -
Tsu07g02978 902 Pfam NOT2 / NOT3 / NOT5 family 758 896 IPR007282 GO:0006355
Tsu07g02978 902 MobiDBLite consensus disorder prediction 641 660 - -
Tsu07g02978 902 Gene3D - 742 897 IPR038635 -
Tsu07g02978 902 MobiDBLite consensus disorder prediction 585 631 - -
Tsu07g02978 902 PANTHER CCR4 NOT-RELATED 1 246 IPR040168 GO:0030015
Tsu07g02978 902 PANTHER CCR4 NOT-RELATED 254 902 IPR040168 GO:0030015
Tsu07g02978 902 PANTHER BNAA10G16600D PROTEIN 1 246 - -
Tsu07g02978 902 PANTHER BNAA10G16600D PROTEIN 254 902 - -
Tsu07g02978 902 PIRSF NOT_su_3_5 1 902 IPR012270 GO:0006355|GO:0030015
Tsu07g02978 902 MobiDBLite consensus disorder prediction 416 442 - -
Tsu07g02978 902 MobiDBLite consensus disorder prediction 110 131 - -
Tsu07g02978 902 MobiDBLite consensus disorder prediction 382 399 - -
Tsu07g02978 902 Pfam Not1 N-terminal domain, CCR4-Not complex component 4 235 IPR007207 GO:0005634|GO:0006355
Tsu07g02978 902 Coils Coil 132 159 - -
Tsu07g02978 902 MobiDBLite consensus disorder prediction 292 345 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02978 K12580 - gmx:100783415 1398.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02978 07 35442698 35452458 Tsu07g02978 07 35442698 35452458 ECH