Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02940 ATGTTATCACAAGGTGTATACTCTGTATTGAATCCAATTATCTGTTCATcactcaaaaacaacaacaacaacaacaacaaaaacaagacCAAACCGTTGTCTTCTCCTTCTCTGTTCTGTAACAATAACATCAATTATAGAACAAGAAGGTTTTTGATGATGGCTACAAATCATAGAACAAACAATTTTCTTCGTCATATGGAATCAATGAAGATTCTTCCTTCTGGTGCTGGTTGCATTCCTCATTTGAATGCTGTTATTCTCGGTGAATCTCTTGCCactgaagaaaatgattttgttcTTCCAAGCGAAGAATTTGCTTCTCAAGCAAATGTTCAGTCTCCAGAAcagTATCTGAAGATGTATAAGAGATCAATTGAGGATCCTGCTGGATTTTGGTCTGACATTGCATCAGAGTTCTATTGGAAACAAAAATGGGGTGATCAAGTTTGTaatgaaaattttgatgttAGGAAAGGAAATATTAACATCGagTGGTTCAAAGGTGGGATCACCAACATATGTTATAATTGTTTGGATAGAAATGTTGAAGCTGGACTTGGTGATAAAGTAGCTTTTTATTGGGAAGGAAATGAACTTGGTGTTGATGCTACTTTAACATACACTCAGCTTCTCCATCAAGTTTGTCagGTTGCAAACTACCTAAAAGATATCGGTGTGAAGAAGGGAGATGCTGTGATTATTTATTTGCCTATGCTTATGGAGCTTCCTATCACAATGCTTGCTTGTGCCCGCATTGGTGCTGTTCATTCGGTTGTATTTGCCGGTTTTTCTTCAGAATCTCTTTCACAGAGAATCATTGATTGTAAGCCAAAAGTTGTAATTACTTGCAATGCTGTTAAAAGGGGCTCTAAGGTTATCTATCTGAAAGACATAGTTGATACTGCCATCAATGATTCAACTCAAAATGGGGTCTCTATAGATGTATGCCTAACTTATGATAACACATATGCATTAAAGAGGGAGGATACTAAATGGACGGAAGGGCGAGATATATGGTGGCAGGATGTCATTCCTCAATATCCAACTACTTGTCCAGTGGAGTGGCTTGATGCAGAAGATCCACTTTTTCTGCTCTATACAAGTGGGAGTACCGGAAAACCTAAGGGTGTCGTCCATACAACTGGAGGTTACATGGTATACACTGCAACGACATTTAAGTATGCATTTGACTATAAGCCATCTGACATCTACTGGTGTACAGCTGATTGTGGTTGGATTACGGGGCACAGCTATGTCACGTATGGACCCATACTCAATGGTGCAACTGTTGTCCTGTATGAAGGGGCTCCCAATTATCCTGATGCTGGGCGTAGTTGGAACATTGttgacaaatataaagtatcAATATTCTACACAGCCCCTACATTGGTGCGGTCTCTCATGCGTGATGGTGACGAGCATGTAACCCGCTACTCGAGGAAATCTTTACGAGTCTTGGGAAGTGTTGGGGAGCCTATAAATCCAAGTGCATGGAGATGGTTTTACAATGTAATTGGAGATTCAAGATGCCCTATCTCTGATACTTGGTGGCAAACGGAAACTGGTGGTTTCATGATAACTCCACTACCTGGTGCTTGGCCGCAAAAACCTGGTTCTGCCACTTGCCCTTTCTTTGGAGTTCAGCCTGTCATAGTGGATGAGAATGGTATTGAGATCGAAGGCGAGTGCAGTGGTTATTTGTGTGTGAAGAGTTCATGGCCAGGAGCATTCAGAACTTTGTATGGTGATCATGAACGATACGAAACAACATATTTCAAACCCTTTGCTGGCTACTATTTCAGTGGTGATGGCTGCAGCAGGGATAAAGATGGATACTATTGGCTTACTGGAAGAGTTGATGATGTCATCAATGTCAGTGGGCATCGTATTGGTACAGCTGAAGTGGAATCAGCTCTAGTTTCACATCCAAAATGTGCCGAAGCTGCCGTTGTAGGCGTTGAGCACGAGGTCAAAGGACAAAGTATATATGCTTTTGTTACTCTTGTGGGTGGTGTTCCATACAGCGAGGAACTACGGAAGGATCTCGTACTCACAGTTCGAAAGCAGATAGGAGCCTTTGCAGCACCTGACAAAATCCATTGGGCACCTGGGCTCCCAAAAACAAGGAGCGGAAAGATAATGAGAAGAATTCTTAGAAAAATTGCTTCTAGGCAATTAGATGAACTCGGAGATACAAGTACCCTTGCAGAGCCAAATGTGGTTAACCAACTTATTGAACTTGCTGATTCATGA 2256 0.3994 MLSQGVYSVLNPIICSSLKNNNNNNNKNKTKPLSSPSLFCNNNINYRTRRFLMMATNHRTNNFLRHMESMKILPSGAGCIPHLNAVILGESLATEENDFVLPSEEFASQANVQSPEQYLKMYKRSIEDPAGFWSDIASEFYWKQKWGDQVCNENFDVRKGNINIEWFKGGITNICYNCLDRNVEAGLGDKVAFYWEGNELGVDATLTYTQLLHQVCQVANYLKDIGVKKGDAVIIYLPMLMELPITMLACARIGAVHSVVFAGFSSESLSQRIIDCKPKVVITCNAVKRGSKVIYLKDIVDTAINDSTQNGVSIDVCLTYDNTYALKREDTKWTEGRDIWWQDVIPQYPTTCPVEWLDAEDPLFLLYTSGSTGKPKGVVHTTGGYMVYTATTFKYAFDYKPSDIYWCTADCGWITGHSYVTYGPILNGATVVLYEGAPNYPDAGRSWNIVDKYKVSIFYTAPTLVRSLMRDGDEHVTRYSRKSLRVLGSVGEPINPSAWRWFYNVIGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATCPFFGVQPVIVDENGIEIEGECSGYLCVKSSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTAEVESALVSHPKCAEAAVVGVEHEVKGQSIYAFVTLVGGVPYSEELRKDLVLTVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLAEPNVVNQLIELADS 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02940 751 CDD ACS 116 738 - -
Tsu07g02940 751 ProSitePatterns Putative AMP-binding domain signature. 365 376 IPR020845 -
Tsu07g02940 751 Pfam Acetyl-coenzyme A synthetase N-terminus 118 178 IPR032387 -
Tsu07g02940 751 TIGRFAM Ac_CoA_lig_AcsA: acetate--CoA ligase 113 747 IPR011904 GO:0003987|GO:0016208|GO:0019427
Tsu07g02940 751 Gene3D - 98 621 IPR042099 -
Tsu07g02940 751 Pfam AMP-binding enzyme 187 626 IPR000873 -
Tsu07g02940 751 PANTHER ACETYL-COENZYME A SYNTHETASE 71 751 - -
Tsu07g02940 751 Gene3D - 622 751 IPR045851 -
Tsu07g02940 751 SUPERFAMILY Acetyl-CoA synthetase-like 104 746 - -
Tsu07g02940 751 Hamap Acetyl-coenzyme A synthetase [acs]. 95 749 IPR011904 GO:0003987|GO:0016208|GO:0019427
Tsu07g02940 751 Pfam AMP-binding enzyme C-terminal domain 635 713 IPR025110 -
Tsu07g02940 751 PANTHER ACETYL-COENZYME A SYNTHETASE 71 751 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02940 Tsu-Chr7 34810276 34817342 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02940 60 750 Acyl Lipid Metabolism Gene Families AT5G36880 83.647 0.0 1240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02940 K01895 - gmx:100789257 1353.19