Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02924 ATGTCGTTTGAAGACGAATGCTTACATCACGACAGTGACTGTGACGACATCAACGACGACGGTGTTGCGTTCGGCGTCGTTTCACTTGACGACGAGGGTTTCCCTTCACAAGTTCCAGTCGAAAACGCTTCACCAAACGAATCGGAGAAAAGCAGTTTCGCTGCCGATTTCTATCGCTGCGGATCCGATTACTCGTCACTGTTATCACCAGAAGACAATGGAAACAACGATTCCCCGCGAGATTTGTTATCTTCAGGGAAGAAACTGAAGCAGGCCAATCTGTTCCAGATTTGGGGATTCAAAAGAAATGTTGCAGTTGGTTCTGTTGAATTTGAATCCAATCGAGATGGTTATTGTGATGATGTAGGTGAGGGAAGTGTTTCATCGGAAAAGAAGATTGTTAAACGTGGAAATTTTGGTTCGATTTTGCGTGATAAAGGGAAAGTTGTTGAGAATCCAAAATCTTCTAGCAAGAGAAAGAGTTTTCATGGAGAGACTAGGGTTACTCGTTCATGTCCCTTTTATAAGAAAATGCCAGGAACAAACTTCACAGTTGATGCTTTTCGTTATGGATGTGTTGAAGAGTGTTCAGCGTACTTTCTTAGTCATTTCCATGCCGATCACTATGGCGGTCTTAGCAAGAAATGGTCACATGGCCCTATTTATTGCTCTCCTCTCACTGGACGGCTAGTTCAAATGTGTCTCTATGTAAATCCTTCGTACATCTGCCCTTTGGAGTTTGACACTGAATATGTGATTGATGGTATCAAAGTGACTTTTATAGATGCTAACCATTGCCCTGGTGCAGCTTTGATTCACTTTGAGCTCCCAAATGGACAATGTTATTTGCACACTGGGGATTTTAGAGCTTGTAAACTAATGCAAGACTGCAATCTTTTTGTAAATAAACGTGTGAATGTACTGTATTTGGATACTACATATTGCAACCCTAAGTACAAGTTTCCTTCCAAGGAAGATGTTCTCAACTATGTTGCTAAAATTACAAAGAACCACCTCAAAATGCATCCCAAAACTTTAGTGGTTGTTGGGGCATACAGTATTGGCAAAGAATGTGTATATCTGGCCATTTCTAAGGCACTTGGGGTAAAAATCTATGCAAATGCTTCAAGAAGAAGGATATTGCTAGCTTATGATTGCCCTGACTATTCAGATAGACTCTGTACAGATGGAAATAACACGCTTCTCCATGTTCTGCCCATGTCATCTCTGAGAATTGAGGCTTTGAAGGATTACTTAAAAACCTACAAGGAACAATTCACATCAGTATTGGCATTTCGTCCAACAGGTTGGACCTTCAGTGAGAAGATAGGCAATGATCTGGAACTAATTAAACCTGTTTCCAAAGGAAATATCACGATATATGGGGTTCCCTACAGTGAGCACTCCAGCTTCACAGAACTGCGAGATTTTGTTCAGCAGTTTTTGAGACCGGACAAGATAATCCCTACTGTGAATGTTGGGAGTGCTGCTAGTCGAGAAAAAATGCAATCTTACTTCCGAGACTGGTTGAAGGGCTGA 1539 0.4146 MSFEDECLHHDSDCDDINDDGVAFGVVSLDDEGFPSQVPVENASPNESEKSSFAADFYRCGSDYSSLLSPEDNGNNDSPRDLLSSGKKLKQANLFQIWGFKRNVAVGSVEFESNRDGYCDDVGEGSVSSEKKIVKRGNFGSILRDKGKVVENPKSSSKRKSFHGETRVTRSCPFYKKMPGTNFTVDAFRYGCVEECSAYFLSHFHADHYGGLSKKWSHGPIYCSPLTGRLVQMCLYVNPSYICPLEFDTEYVIDGIKVTFIDANHCPGAALIHFELPNGQCYLHTGDFRACKLMQDCNLFVNKRVNVLYLDTTYCNPKYKFPSKEDVLNYVAKITKNHLKMHPKTLVVVGAYSIGKECVYLAISKALGVKIYANASRRRILLAYDCPDYSDRLCTDGNNTLLHVLPMSSLRIEALKDYLKTYKEQFTSVLAFRPTGWTFSEKIGNDLELIKPVSKGNITIYGVPYSEHSSFTELRDFVQQFLRPDKIIPTVNVGSAASREKMQSYFRDWLKG 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02924 512 Gene3D - 179 491 IPR036866 -
Tsu07g02924 512 SUPERFAMILY Metallo-hydrolase/oxidoreductase 194 503 IPR036866 -
Tsu07g02924 512 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 70 511 - -
Tsu07g02924 512 SMART Lactamase_B_5a 91 342 IPR001279 -
Tsu07g02924 512 Pfam DNA repair metallo-beta-lactamase 390 494 IPR011084 -
Tsu07g02924 512 PANTHER DNA CROSS-LINK REPAIR PROTEIN SNM1 70 511 - -
Tsu07g02924 512 Gene3D - 320 468 - -
Tsu07g02924 512 CDD SNM1A-1C-like_MBL-fold 160 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02924 Tsu-Chr7 34648848 34652645 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02924 K15340 - gmx:100790844 775.393