Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02909 ATGTCTTCTGTGCCAGCAAGAACGGGGCGACAAAGACAACGTTATGAAGATAACCTTCGACTTGTTTCTGGATGTATTCCGTATAGATGGAGAAAGGTGAATGCAGATCAAGTTGGAAAAACCGAGGAAATGATAGAAGTACTTATGATTTCTTCGCCAAAACGTGACGACCTTGTATTTCCAAAGGGTGGCTGGGAGGACGATGAGACTGTTACAGAAGCCGCTTGTCGCGAAGCTATAGAAGAAGCTGGAGTTAAAGGAATACTAAGAgaGACTCCATTAGGAATATGGGAGTTCAGAAGCAAAAGCAGCCAGGACTTGTGTGGCATGGAAGGAGGCTGCAGAGGATACATGTTTGCCTTGGAGGTGACCGAAGAACTCGAGAATTGGCCTGAGCAGAAAAACCGTGCTCGCCGATGGTTAAACATAAAAGAAGCATTTAGACTCAGCCGATACGATTGGATGTGTAACGCACTTGAGGAGTTTACTAAAGCTATGGAAGAAGACATGAAGCTTGAGAAGCAAGACAATAATGTTGACCCCCCTTCGGTTCTCGTAACAGATGTCTCAGAATGTCAAAGTATGTCACCCAACTGCTATAAAAGATCCTCTAATATGCAGCATCACGGCGTTCCTTCTAAAGGCAATCTACTGCAACACGCTTCTCAAGAGATAGCCATCCATTTTGGCTATTGA 696 0.444 MSSVPARTGRQRQRYEDNLRLVSGCIPYRWRKVNADQVGKTEEMIEVLMISSPKRDDLVFPKGGWEDDETVTEAACREAIEEAGVKGILRETPLGIWEFRSKSSQDLCGMEGGCRGYMFALEVTEELENWPEQKNRARRWLNIKEAFRLSRYDWMCNALEEFTKAMEEDMKLEKQDNNVDPPSVLVTDVSECQSMSPNCYKRSSNMQHHGVPSKGNLLQHASQEIAIHFGY 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02909 231 ProSiteProfiles Nudix hydrolase domain profile. 18 163 IPR000086 -
Tsu07g02909 231 ProSitePatterns Nudix box signature. 63 84 IPR020084 GO:0016787
Tsu07g02909 231 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 166 - -
Tsu07g02909 231 SUPERFAMILY Nudix 20 162 IPR015797 -
Tsu07g02909 231 PANTHER NUDIX HYDROLASE 12, MITOCHONDRIAL 1 191 - -
Tsu07g02909 231 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 1 191 - -
Tsu07g02909 231 Pfam NUDIX domain 46 154 IPR000086 -
Tsu07g02909 231 CDD Nudix_Hydrolase_9 21 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02909 Tsu-Chr7 34410084 34414692 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02909 K07766 - gmx:100794003 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02909 07 34410084 34414692 Tsu07g02909 07 34410084 34414692 ECH