Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02877 atGGAAGATAGTTTCAGAGTTCGAGTAGAGAAAGCTTTCGGTTCTCTTCCAATACCTTCTTCTGCTTCTCTTTGGTCTCTCTCCGAAGACGAAATCAACAACAACCGACCTAATCCTAAACCCAAACCCGAATCCGAACCAAAACCCTACCCAACTTCTTCCGGTGTCAAAATTGAGCTTGAAAACGATCTCGACGAAGATGAAAACGCTGCCGGTCCATCTAAACCGTCCGATTACAATGATGAACAGTGGGAAATTAGGTCTTCTATTGGCCTTGATCCTACCCTTGATTTTGAGGATGAGGAAGATCATTATGACAAACAGGCTCTTGGCAAAGAGAACACTGGGGATCGTTTGTATATGAGGGAGATAAATGAAGATGGAATTGGGATAAGTTCTCGTGTGTTTGGAGATTTTTCGAGGGACCCACGAGCTAATCACATGGCTGCTAAGATAAAGCTGAAGCAAGATGATGAAGCAgctaaaaaaattgatactGTGCATGTCTCTGAGAAATCTACACTGGATATTGCTGATAGTGGGGCTGATGCTGTTaacccaaaatcaattttgaagaGTAAAGATAATCCTTCAGAGTCTAGGCCTAATAAACGTGTTCGGTTTGATTCTGAATGTGATGATAGAGATggtattgatgatgatgatgacgatgatggTGATGAGAAGGAAGGAACCAGGGATGTTCGCATGAAGACCTCTACAATGGAAGAGGATGCAGCTTTAAACCAGCCATCAAAGTCACGGGAATTTGCCTCAGCAGTTCCTGATTATATTCGCAATCCTTCAAAATACACACATTATACATTTGATTCTGAAACCGACATGGATGACAAAGCAAATAAAGAGGCATACATGAACTTCCTTGCACAGATAAAAGCTTCAAAAGAATCATCACAAACAGATGAAGCTTTGGATGATCTTCCATCAGTTACCTTTATACCAAAGAAGAAATCTGGTGATGTCACTATGGGAGAGAATGAGACAGCGTCAAAGCTAAAGCTTGACGTTGGCAAGGAGGGTGCGAATAAAAAAGCCTTCCCTGTTAGCATAGCAACTGATGATGACACTGAAAACAGTGATGTATGTGCAATGGAAGAGGATGAACTGGAAGTTATCGAGAATACTAAAAAATCCGCTCAGAAGTCGAACCGCAAGTACAGGAAGAAAACCGAGGATGATTTGGAGGAGCCAGCTGTGTAG 1221 0.3997 MEDSFRVRVEKAFGSLPIPSSASLWSLSEDEINNNRPNPKPKPESEPKPYPTSSGVKIELENDLDEDENAAGPSKPSDYNDEQWEIRSSIGLDPTLDFEDEEDHYDKQALGKENTGDRLYMREINEDGIGISSRVFGDFSRDPRANHMAAKIKLKQDDEAAKKIDTVHVSEKSTLDIADSGADAVNPKSILKSKDNPSESRPNKRVRFDSECDDRDGIDDDDDDDGDEKEGTRDVRMKTSTMEEDAALNQPSKSREFASAVPDYIRNPSKYTHYTFDSETDMDDKANKEAYMNFLAQIKASKESSQTDEALDDLPSVTFIPKKKSGDVTMGENETASKLKLDVGKEGANKKAFPVSIATDDDTENSDVCAMEEDELEVIENTKKSAQKSNRKYRKKTEDDLEEPAV 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02877 406 MobiDBLite consensus disorder prediction 177 261 - -
Tsu07g02877 406 MobiDBLite consensus disorder prediction 380 406 - -
Tsu07g02877 406 MobiDBLite consensus disorder prediction 194 213 - -
Tsu07g02877 406 MobiDBLite consensus disorder prediction 214 228 - -
Tsu07g02877 406 Pfam Tumour suppressing sub-chromosomal transferable candidate 4 188 310 IPR029338 -
Tsu07g02877 406 Coils Coil 369 396 - -
Tsu07g02877 406 MobiDBLite consensus disorder prediction 19 34 - -
Tsu07g02877 406 PANTHER TUMOR SUPPRESSING SUBTRANSFERABLE CANDIDATE 4 TSSC4 1 400 IPR029338 -
Tsu07g02877 406 MobiDBLite consensus disorder prediction 18 117 - -
Tsu07g02877 406 MobiDBLite consensus disorder prediction 101 117 - -
Tsu07g02877 406 PANTHER BNAC09G30840D PROTEIN 1 400 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02877 - - gmx:100819106 455.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02877 07 33957717 33960311 Tsu07g02877 07 33957717 33960311 ECH