Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02874 ATGATAATGGCCAACAAGGTGGTGCTGATATTCACCGTTTTGGTATCTGCAATTTGTGTAGCAAAATCAGAGTACATAGACTACAACACAACACATAGAATCATCCCCAACAAATTAAACGTTCACTTGGTTCCTCACTCCCATGATGATGTTGGTTGGCTTAAAACAGTTGATCAGTACTACGTTGGATCCAATAACTCCATTCGGGGTGCATGTGTGCAGAACGTGCTTGATTCTGTCATATCTTCACTCTTGGAGGATCAAAATCGCAAATTTATCTATGTTGAAATGgcaTTTTTCCAGAGATGGTGGAGGCAACAAAGTAAAGCTAAGAAACTTAAAGTCAAAGAGCTTGTCAACTCGGGTCAGCTCGAATTCATAAATGGTGGTATGTGCATGCATGATGAGGCTACCCCGCATTACATTGACCTGATTGATCAGACCACTCTCGGGCATCAATTCATTAAAGACGAGTTTGGTAAGATTCCAAGAGTTGGTTGGCAGATTGATCCGTTTGGCCATTCTGCAGTTCAGGCTTACTTACTTGGAGCTGAGCTAGGATTCGATTCGCTCTTTTTTGCTCGAATTGATTACCAAGATAGAGCCAAGCGATTAAAGGAGAAAACTCTAGAGGTTGTTTGGCAAGGTTCCAGGTCTCTTGGCTCTTCTTCACAAATATTTACTGGGATATTTCCCAGGCATTATGATCCTCCTGATGGTTTCACGTTCGAGATAAATGATGTTTCCCAACCTATTCAGGACGACATTCTACTGTTTGATTATAATGTTGAAGAAAGAGTCAATGACTTTGTATCTGCTGCCTTAGCTCAGGCTAATGTGACTAGGACGAATCACATAATGTGGGAAATGGGAACAGACTTCCGTTATCAATATGCTAATTCATGGTTTAGGCAGATGGATAAGTTTATTCACTATGTCAATCAGGATGGTCGAGTCAATGCATTGTATTCAACACCATCTATCTACACTGATGCAAAATATGCAGCCAACGAGCAATGGCCACTTAAAACTGATGATTTCTTCCCGTATGCTGATCATCCAAATGCATATTGGACCGGTTATTTTACAAGTAGGCCAGCTTTAAAGGGTTATGTGAGAGTGATGAGTGGTTACTATCAGGCAGCAAGGCAATTGGAATTTTTTAAAGGGAGGAATGAATCAGGACCAAATACCGATGCATTAGCTGATGCTTTAGCGCTTGCTCAGCACCATGATGCTGTTAGTGGCACAGAAAGACAGCATGTTGCTGCTGATTATGCAAAGCGGATCTCAATAGGCTATGCTGAGGCAGAAGGCTTGGTTGCATCTGCACTTGCTTTATTGGTAAACCAAAGATCAAATTCACACATGATAAACTCGGTGACAGGCTTCCAGCAGTGCCCTCTTCTTAATATAAGCTACTGTCCTCCTTCAGAAGCTACCTTGTCTAATGGAAAAAGCCTGGTGATTGTTGTTTATAATCCTCTTGCTTGGAAGAGGGAGGAAGTAATTCGAATTCCTGTTTCCACAAGCGAGGTTTCTGTCCAGGATTCTTCTGGGAAAGTAATTGAGTCTCAGCTTCTGCCTCTATCTAATATTACTTTGAGcgtaagaaaaaaatatgtcaaagcATATATAGGAACAGCTCCTGCTGAGGAACTCAAATATTTGCTTGCATTTTCGGTATCTGTACCTCCCATTGGCTTCAGCACATATATAGTATCAAAGCCTAAACAGACAAGTCGTATTTCAACTATCTCAAAGGAGTTCAGATCAGAAGGAAGTACCAATAATAGCATAGAAGTCGGACAAGGGAATTTAAAGCTACTTTATTCTGCAGATGAAGGAAAGTTGACTCATTATGTTAACAGCAGAAATCAAGTTACAGCATCAGTTGAACAATCATACGGTTTCTATTCTGGATACATTGGGGATGATAAAGATTCTCAGgCTTCCGGGGCATACGTCTTCCGTCCAAATGGCTCGTTTCCCATTAAATCTGATCAGGCATCTTTAACTGTCCTGCGTGGTCCGATATTGGATGAAGTACATCAACAGCTCAATCCATGGGTATCTCAGATTACGAGGATATATAAGGAAAAGGAGCATGCTGAAGTTGAGTTCACAATTGGGCCTATACCTGCGGATGATGGCATTGGGAAAGAAGTTATTACTCAATTTTCAACTACAATGAAGACCGACAAGACATTCTACACGGATTCTAATGGACGCGACTTTATTAAAAGGATTCGAGATTTCAGGACTGACTGGGATCTAGAAGTGCACCAACCCATCGCTGGAAACTATTATCCAGTTAATTTAGGAATATATATGCAAGATAGCAGTACGGAACTCTCGGTCTTGGTGGACCGCTCGGTTGGGGGTTCCAGTTTGGTAGATGGTCAAATAGAGCTGATGCTCCACAGGAGGTTGCTACATGATGATGCAAGAGGTGTTGGAGAGACACTTAATGAAACCGTTTGCATTGCTGATAAATGTGAAGGCTTAACCATTCAAGGAAAACTGTACCTTAGAATTGACCGTAAAGGTGAAGGAGCTAAATGGCGACGTACAGTTGGCCAGGAATTATATTCACCTTTGCTGTTGGCCTTCACTGAGCAGGATGGGGATAATCAGTTGCATTTCCAACAACCAACATTTTCTGGCATAGATTCTTCTTACAGTTTACCAAACAACACCGCGCTTCTAACTCTCCAGGAATTTGGAAATGGAAAAGTACTCTTAAGACTGGCTCACCTTTATGAGGTTGGAGAGGACAAAGATTATTCGGTAACCGCAAATGTAGAATTGAAAAAGCTTTTCCCTAACAAGAAGATAAGTAAAGTGACAGAGATGAGTTTATCTGCTAATCAAGAAAGAGCTGAAATGgaaaagaagaaattaatttgGAAAGTAGAAGGAGACTCCAATGAAAAATCTAAGGTGGTGAGGGGAGGACCTGTTGATCCTACAAAGCTTGTTGTTGAACTTGCTCCGATGGAGATTCGGACATTCTTTGTCGACTTTAATCCCCTCCAAGAAGTTCATACACAGAAAATCATGTAG 3066 0.4077 MIMANKVVLIFTVLVSAICVAKSEYIDYNTTHRIIPNKLNVHLVPHSHDDVGWLKTVDQYYVGSNNSIRGACVQNVLDSVISSLLEDQNRKFIYVEMAFFQRWWRQQSKAKKLKVKELVNSGQLEFINGGMCMHDEATPHYIDLIDQTTLGHQFIKDEFGKIPRVGWQIDPFGHSAVQAYLLGAELGFDSLFFARIDYQDRAKRLKEKTLEVVWQGSRSLGSSSQIFTGIFPRHYDPPDGFTFEINDVSQPIQDDILLFDYNVEERVNDFVSAALAQANVTRTNHIMWEMGTDFRYQYANSWFRQMDKFIHYVNQDGRVNALYSTPSIYTDAKYAANEQWPLKTDDFFPYADHPNAYWTGYFTSRPALKGYVRVMSGYYQAARQLEFFKGRNESGPNTDALADALALAQHHDAVSGTERQHVAADYAKRISIGYAEAEGLVASALALLVNQRSNSHMINSVTGFQQCPLLNISYCPPSEATLSNGKSLVIVVYNPLAWKREEVIRIPVSTSEVSVQDSSGKVIESQLLPLSNITLSVRKKYVKAYIGTAPAEELKYLLAFSVSVPPIGFSTYIVSKPKQTSRISTISKEFRSEGSTNNSIEVGQGNLKLLYSADEGKLTHYVNSRNQVTASVEQSYGFYSGYIGDDKDSQASGAYVFRPNGSFPIKSDQASLTVLRGPILDEVHQQLNPWVSQITRIYKEKEHAEVEFTIGPIPADDGIGKEVITQFSTTMKTDKTFYTDSNGRDFIKRIRDFRTDWDLEVHQPIAGNYYPVNLGIYMQDSSTELSVLVDRSVGGSSLVDGQIELMLHRRLLHDDARGVGETLNETVCIADKCEGLTIQGKLYLRIDRKGEGAKWRRTVGQELYSPLLLAFTEQDGDNQLHFQQPTFSGIDSSYSLPNNTALLTLQEFGNGKVLLRLAHLYEVGEDKDYSVTANVELKKLFPNKKISKVTEMSLSANQERAEMEKKKLIWKVEGDSNEKSKVVRGGPVDPTKLVVELAPMEIRTFFVDFNPLQEVHTQKIM 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02874 1021 Gene3D Glycoside hydrolase 38, N terminal domain 39 319 IPR027291 -
Tsu07g02874 1021 SUPERFAMILY Families 57/38 glycoside transferase middle domain 356 458 IPR028995 -
Tsu07g02874 1021 Pfam Glycosyl hydrolases family 38 C-terminal domain 604 817 IPR011682 GO:0004559|GO:0006013
Tsu07g02874 1021 SUPERFAMILY Glycoside hydrolase/deacetylase 28 354 IPR011330 GO:0005975
Tsu07g02874 1021 CDD GH38N_AMII_LAM_like 39 315 - -
Tsu07g02874 1021 Gene3D - 476 599 IPR013780 -
Tsu07g02874 1021 SUPERFAMILY Galactose mutarotase-like 457 1009 IPR011013 GO:0003824|GO:0005975|GO:0030246
Tsu07g02874 1021 Pfam Alpha mannosidase middle domain 356 448 IPR015341 GO:0004559|GO:0006013
Tsu07g02874 1021 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 900 1006 IPR041147 -
Tsu07g02874 1021 SMART Alpha_mann_mid_2 356 430 IPR015341 GO:0004559|GO:0006013
Tsu07g02874 1021 PANTHER ALPHA-MANNOSIDASE 12 1013 - -
Tsu07g02874 1021 Pfam Glycosyl hydrolases family 38 N-terminal domain 40 351 IPR000602 GO:0004559|GO:0006013
Tsu07g02874 1021 PANTHER ALPHA-MANNOSIDASE 12 1013 - -
Tsu07g02874 1021 Gene3D Glycoside hydrolase family 38, central domain 399 455 IPR037094 GO:0004559|GO:0006013
Tsu07g02874 1021 Gene3D - 884 1012 - -
Tsu07g02874 1021 Gene3D Glycoside hydrolase family 38, central domain 320 398 IPR037094 GO:0004559|GO:0006013
Tsu07g02874 1021 Gene3D - 600 865 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02874 Tsu-Chr7 33897358 33906219 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02874 3 948 Glycoside Hydrolase AT3G26720 73.945 0.0 1488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02874 K01191 - gmx:100795651 1760.35