Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02859 ATGCTCAGAACACTAGCCAGGGAGTTGAAGCTCACCAACATCATCAGCAATAGTAATTTGGTTAGAAAAAGCAGCAGATTCTATGCAACGGTTGGTGGAAGAAGGTTAGAAGGAAAAGTAGCAATCATAACAGGAGCAGCAAGTGGACTTGGAAAGGCCACAGCCCATGAATTTATCCAACATGGTGCCCAAGTCATCATTGCTGACAATGACACTCAACTTGGGCCTCAAGTTGCAAAGGAATTGGGCCCATCAGCCCAATATGTAGAATGTGATGTCACTATTGAGGCCCAAATTGAAGAAGCTGTGAATATTGCCATGACAAAGTATGGTAAACTAGACATCATGTACAACAATGCTGGCATAACAGGCCCAATAATCCCACATAGCATAACAGAATTGGACCTTGATGAATTTGACAAGGTCATGAGACTCAATGTTACTGGAATCATTGGAGGTATAAAACACGCGGCCCGAGTGATGGTACCCGTGGGTTATGGGTCCATTATATGCACATCAAGCATAAGTGGGCTATTAGGTGGGCTTGGGCCTCATCCATACACAATTTCAAAATCTACAATACCCGGTGTAGTGAAATCTGCGGCTAGTGAACTATGTGGAGCTGGGATCAGAGTCAATTGCATATCACCAGCTGCAATTCCTACACCAATGTCATTGGGTCAAGTTGGAAAATTTCTTCCTGGTTTCACCCCAGAACAGATAGGGGAAATTGTTAGTGGACTTGGTGTTCTCAAAGGTGCAAAATGTGAGGGCATTGATATTGCTAGGGCTGCGTTGTACTTGGCATCAGATGACTCAAAGTTTATTTCCGGTCTCAACCTCATTGTTGATGGAGGGTTCACTTGCTTTAAAAATTTCGTGTTTCCTTCTCCGGATCAATCAGCCTAA 909 0.4367 MLRTLARELKLTNIISNSNLVRKSSRFYATVGGRRLEGKVAIITGAASGLGKATAHEFIQHGAQVIIADNDTQLGPQVAKELGPSAQYVECDVTIEAQIEEAVNIAMTKYGKLDIMYNNAGITGPIIPHSITELDLDEFDKVMRLNVTGIIGGIKHAARVMVPVGYGSIICTSSISGLLGGLGPHPYTISKSTIPGVVKSAASELCGAGIRVNCISPAAIPTPMSLGQVGKFLPGFTPEQIGEIVSGLGVLKGAKCEGIDIARAALYLASDDSKFISGLNLIVDGGFTCFKNFVFPSPDQSA 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02859 302 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 10 299 - -
Tsu07g02859 302 PRINTS Glucose/ribitol dehydrogenase family signature 111 122 IPR002347 -
Tsu07g02859 302 PRINTS Glucose/ribitol dehydrogenase family signature 251 271 IPR002347 -
Tsu07g02859 302 PRINTS Glucose/ribitol dehydrogenase family signature 208 225 IPR002347 -
Tsu07g02859 302 PRINTS Glucose/ribitol dehydrogenase family signature 40 57 IPR002347 -
Tsu07g02859 302 PRINTS Glucose/ribitol dehydrogenase family signature 161 177 IPR002347 -
Tsu07g02859 302 PRINTS Glucose/ribitol dehydrogenase family signature 187 206 IPR002347 -
Tsu07g02859 302 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 37 289 IPR036291 -
Tsu07g02859 302 Pfam Enoyl-(Acyl carrier protein) reductase 45 288 - -
Tsu07g02859 302 PANTHER ALCOHOL DEHYDROGENASE-LIKE PROTEIN 10 299 - -
Tsu07g02859 302 Gene3D - 29 295 - -
Tsu07g02859 302 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 187 206 IPR002347 -
Tsu07g02859 302 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 175 IPR002347 -
Tsu07g02859 302 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 111 122 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02859 Tsu-Chr7 33714563 33718504 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02859 36 288 Acyl Lipid Metabolism Gene Families AT1G63380 31.559 4.52e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02859 - - cam:101504238 488.419