Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02730 atgCTCCGCACTGAACTTTCATGGATCAaacccaggaccaaatggttaaagggccaagtatctaccacttgtgtcacactatgttggtcGTTCATAGTGTttagtgtttttgtttttaacaggAGACAAGTTCTTTCGGCTGTTCCACATCTCTTGGAAACTGTTCAGGTTGAAGCTACCTTTCATGATGGGACTAAGTTAATCACGGTTCATAACCCAGTTGCTTGTGAAAATGGAAACCTTGAACTAGCATTATATGGTTCTTTTCTTCCAGTACCTTCGCTTGACATGTTTATCGACAACAAAGAAGATAGTATCATTCCCGGTGAGCTAAAATCTGAAGATGGAAGCCTGATTCTTAACGCTGGAAGGGAGGCAGTCTCTCTTAAAGTTGTAAACAATGGAGACAGGCCAATTCAGGTTGGAAGCCACTATCATTTTATTGAAGTAAATCCCTACTTAACCTTTGATCGAAGAAAAGCATTTGGCAAGCGCCTCAATATAGCCTCTGGGACTACCACGCGCTTTGAGCCAGGGGAAAGTAAAAGTGTTGTACTGGTAAGCATTGGAGGTAACAAAGTCATTCGAGGAGGTAACAACATTGTTGATGGTCCAGTTAACGATTCCAATTGCATAGCAGCCATGGAAACTGTGACAACAAGGGGGTTCGGTCATAAGGACGATGAAAATGCAAGGGAAGGTATTACCGGAGAAGACTATTCATTAACTAAAATAATTCCTCGAGAAGAATATGCTAACAAGTATGGCCCCACTGTTGGTGACAAAATTCGTCTTGGTGACACTAACTTGTTTGCGGAAATTGAAAAAGATTTTGCTGTCTATGGTGATGAATGTGTTTTTGGAGGTGGGAAAGTCATAAGAGATGGAATGGGTCAGTCGTGTGGCCATCATCCTGATCACTCCTTGGATACTGTTATAACAAATGCAGTGATCATTGATTACACCGGAATTTACAAAGCAGATATTGGTATTAAAGATGGCCTTATTGCCTCAATTGGAAAAGCAGGAAATCCAGACGTTATGAATGGCGTATTTGATAATATGATTGTTGGGGCTAATACTGAAGTTATTTCTGGAGAGGGCTTTATTGTAACAGCTGGGGCTACAGACTGTCATGTGCATTTTATATGCCCTCAATTAGTATATGAAGCCGTATCAAGTGGGATTACAACATTAGTGGGAGGAGGAACCGGACCAGCATATGGAACGCGTGCTACAACTTGTACACCGGCACCGATTCAGATGCAAATGATGCTGCAATCAACAGATGAGCTGCCTCTGAACTTCGGTTTTAATGGAAAAGGAAATTGTGCCAAGCCTGATGAATTACATGAAATAGTCAAGGCCGGAGCTATGGGACTGAAGCTGCATGAGGATTGGGGAACTACACCAGCCGCAATAGACAGCTGTTTGACTGTTGCAGAAGAATATGATATCCAGGTTAACATACATACTGACACGTTAAATGAATCTGGATTTGTGGAACATACAATTGCTGCATTTAAAGAAAGAACTATTCATACTTACCACAGTGAAGGTGCAGGTGGTGGCCATGCTCCAGATATCATCAAAGTGTGTGGTGTGAAGAATGTCTTACCCTCGTCCACAAATCCTACGCGTCCTTTTACATCAAATACCATAGATGAGCATCTTGATATGTTGATGGTCTGCCATCATCTTGATAAGAACATTCCAGAAGATGTTGCTTTTTCAGAATCGAGGATAAGAGCCGAAACAATTGCTGCTGAAGATATTTTGCATGATATGGGTGCAATTAGCATTATATCTTCTGATTCACAGGCTATGGGTAGAATTGGAGAGGTGATAAGCAGAACTTGGCAAACTGCCAATAAGATGAAGTCGCAAAGAGGACCTCTGCAGCATGATGATTCAGACAATGACAACTTTCGAATCAAACGTTATGTTGCAAAGTACACTATAAATCCAGCTATAGCGAATGGTTTGTCACGATATATTGGTTCAGTTGAGGTGGGAAAGTTAGCTGATCTTGTATTATGGCAACCAGCTTTTTTTGGAGCAAAACCGGAAATGGTGATCAAAGGTGGTGACATTGCATGGGCTAACATGGGTGACCCAAACGCTAGCATCCCAACACCTGAACCGGTGATTATGAGACCTATGTTTGGAGCATTTGGCAAAGCTGGCAGTGCAAACTCTATTGCTTTTGTGAGCAAGGCAGCTTTGGACTACGGTGTAAAAGCTTTATATGGACTTAACAAGCAGGTGAAAGCCGTGGACAATGTGAGAAAGCTCACCAAACTAGACATGAAACTGAACGACGCCCTTCCAGAAATCACTGTGGACCCAGAGACATATACAGTCACTGCAGATGGAGAGGTTCTATCCTGTACTGCAGCCACTACTGTTCCTCTTTCCCGAAATTACTTCCTCTTCTAA 2439 0.4071 MLRTELSWIKPRTKWLKGQVSTTCVTLCWSFIVFSVFVFNRRQVLSAVPHLLETVQVEATFHDGTKLITVHNPVACENGNLELALYGSFLPVPSLDMFIDNKEDSIIPGELKSEDGSLILNAGREAVSLKVVNNGDRPIQVGSHYHFIEVNPYLTFDRRKAFGKRLNIASGTTTRFEPGESKSVVLVSIGGNKVIRGGNNIVDGPVNDSNCIAAMETVTTRGFGHKDDENAREGITGEDYSLTKIIPREEYANKYGPTVGDKIRLGDTNLFAEIEKDFAVYGDECVFGGGKVIRDGMGQSCGHHPDHSLDTVITNAVIIDYTGIYKADIGIKDGLIASIGKAGNPDVMNGVFDNMIVGANTEVISGEGFIVTAGATDCHVHFICPQLVYEAVSSGITTLVGGGTGPAYGTRATTCTPAPIQMQMMLQSTDELPLNFGFNGKGNCAKPDELHEIVKAGAMGLKLHEDWGTTPAAIDSCLTVAEEYDIQVNIHTDTLNESGFVEHTIAAFKERTIHTYHSEGAGGGHAPDIIKVCGVKNVLPSSTNPTRPFTSNTIDEHLDMLMVCHHLDKNIPEDVAFSESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVISRTWQTANKMKSQRGPLQHDDSDNDNFRIKRYVAKYTINPAIANGLSRYIGSVEVGKLADLVLWQPAFFGAKPEMVIKGGDIAWANMGDPNASIPTPEPVIMRPMFGAFGKAGSANSIAFVSKAALDYGVKALYGLNKQVKAVDNVRKLTKLDMKLNDALPEITVDPETYTVTADGEVLSCTAATTVPLSRNYFLF 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02730 812 PRINTS Urea amidohydrolase (urease) protein signature 646 661 IPR005848 GO:0006807|GO:0009039|GO:0016151
Tsu07g02730 812 PRINTS Urea amidohydrolase (urease) protein signature 540 557 IPR005848 GO:0006807|GO:0009039|GO:0016151
Tsu07g02730 812 PRINTS Urea amidohydrolase (urease) protein signature 579 595 IPR005848 GO:0006807|GO:0009039|GO:0016151
Tsu07g02730 812 PRINTS Urea amidohydrolase (urease) protein signature 672 685 IPR005848 GO:0006807|GO:0009039|GO:0016151
Tsu07g02730 812 CDD Urease_alpha 246 811 IPR005848 GO:0006807|GO:0009039|GO:0016151
Tsu07g02730 812 SUPERFAMILY Urease, gamma-subunit 37 78 IPR036463 GO:0016151|GO:0043419
Tsu07g02730 812 Pfam Urease alpha-subunit, N-terminal domain 246 364 IPR011612 -
Tsu07g02730 812 ProSitePatterns Urease active site. 562 578 IPR017950 GO:0009039
Tsu07g02730 812 Pfam Amidohydrolase family 370 695 IPR006680 GO:0016787
Tsu07g02730 812 TIGRFAM urease_beta: urease, beta subunit 106 207 IPR002019 GO:0035550|GO:0043419
Tsu07g02730 812 SUPERFAMILY Composite domain of metallo-dependent hydrolases 245 422 IPR011059 GO:0016810
Tsu07g02730 812 PANTHER UREASE 38 812 - -
Tsu07g02730 812 Gene3D Urease, subunit C, domain 1 244 725 IPR011059 GO:0016810
Tsu07g02730 812 SUPERFAMILY Urease, beta-subunit 106 235 IPR036461 -
Tsu07g02730 812 ProSiteProfiles Urease domain profile. 374 812 IPR017951 GO:0006807|GO:0009039|GO:0016151
Tsu07g02730 812 CDD Urease_beta 106 206 IPR002019 GO:0035550|GO:0043419
Tsu07g02730 812 PIRSF Urease 31 812 IPR008221 GO:0006807|GO:0009039|GO:0016151
Tsu07g02730 812 SUPERFAMILY Composite domain of metallo-dependent hydrolases 654 724 IPR011059 GO:0016810
Tsu07g02730 812 SUPERFAMILY Metallo-dependent hydrolases 376 812 IPR032466 -
Tsu07g02730 812 Pfam Urease, gamma subunit 38 74 IPR002026 GO:0016151|GO:0043419
Tsu07g02730 812 TIGRFAM urease_alph: urease, alpha subunit 246 812 IPR005848 GO:0006807|GO:0009039|GO:0016151
Tsu07g02730 812 Hamap Urease subunit beta [ureB]. 106 206 IPR002019 GO:0035550|GO:0043419
Tsu07g02730 812 Gene3D Urease, beta subunit 124 243 IPR036461 -
Tsu07g02730 812 Pfam Urease beta subunit 108 204 IPR002019 GO:0035550|GO:0043419
Tsu07g02730 812 Gene3D - 374 793 - -
Tsu07g02730 812 Pfam Urease subunit beta-alpha linker domain 206 239 IPR040881 -
Tsu07g02730 812 Gene3D - 30 98 IPR036463 GO:0016151|GO:0043419
Tsu07g02730 812 Hamap Urease subunit alpha [ureC]. 244 812 IPR005848 GO:0006807|GO:0009039|GO:0016151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02730 K01427 - gmx:547672 1342.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02730 07 31981653 31988715 Tsu07g02730 07 31981653 31988715 ECH