Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02728 ATGCTGCAATCAGAAAGATCGCTTCGTAGCAACCTTCCAATAATTCGAATACCAGGAGATGGTAGATGTATGTTTAGATCTGTGGTCTATGGTGCCTGCCTCAGAACAGGAGACCCACCTCCAAGTCTCACTAGACAAAAAGAACTTGCAGATGAACTAAGAGCCAAAGTTGTGGATGAATTCATCAAAAGGAGAGCAGACACTGAGTGGTTTCTTGAAGGCGACTTTAACACCTATACAATACAAATGAGAAAGTCTCAAGTATGGGGAGGAGAACCTGAACTTCTCATGTCATCACATGTATTACAGATGCCTATAACTGTGATCATGCATGATACAAATTCAAATAACCTTAAAATTATAGCTGAATATGGTCAGGAGTATGGGAAGGAGAAGCCTATTAGAGTCATCTATGATGGTTTTGGCCACTATGATGTATTGAAGTGTTCGACATGA 456 0.4035 MLQSERSLRSNLPIIRIPGDGRCMFRSVVYGACLRTGDPPPSLTRQKELADELRAKVVDEFIKRRADTEWFLEGDFNTYTIQMRKSQVWGGEPELLMSSHVLQMPITVIMHDTNSNNLKIIAEYGQEYGKEKPIRVIYDGFGHYDVLKCST 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02728 151 ProSiteProfiles OTU domain profile. 12 150 IPR003323 -
Tsu07g02728 151 Gene3D - 2 151 - -
Tsu07g02728 151 PANTHER OS09G0487700 PROTEIN 14 149 - -
Tsu07g02728 151 Pfam OTU-like cysteine protease 18 144 IPR003323 -
Tsu07g02728 151 SUPERFAMILY Cysteine proteinases 10 147 IPR038765 -
Tsu07g02728 151 PANTHER OTU DOMAIN CONTAINING PROTEIN 14 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02728 Tsu-Chr7 31934471 31936797 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02728 K18342 - gmx:100792132 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02728 07 31934471 31936797 Tsu07g02728 07 31934471 31936797 ECH