Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02720 ATGTCGCTCGCATCGTTCTCCATTGTCCGCCACCACCGCACGGTGGCTACCGCCATCCCTCAACTTCTCCGCCGATTCAGTTACTTCCAAATTTCCGCCAGACAACAAAACCCTAAGCAAGATGCCCCAAGCAAGAATCTCCTGAAAGCAAAACACACATTGAAAAACTTCTCCTCTCTCGCTCCCATTCTCTCCCGCGAAGACAATCCTCTTCTCTCCGAATCCCAAGCTATTGGCATCGTCGCTTCATCACAAGCCAATTTCATGCGCGTAATCGTCCAATCAGAACCTTCTAGAACCTCCCACGATGTTTCCGGTGTGGAGCTTTTGTGCGTTGTGAGAGCTTTGTTGAAGAAGATAAAACGTAGGGTTATGGTTGGTGATAAGGTTCTAGTAGGTTCTGTTGATTGGGTAGATCGTAGGGGTATGATTGAAAACGTGTTTCAAAGAAATTCTGAGATTCTTGATCCTCCTGTGGCTAACGTAGATCATTTACTTGTTCTCTTCTCGCTTGATCAACCAAAGCTTGAGCCATTTACTCTTACACGGTTTTTGGTGGAAGCTGAATCCACTGGAATTCCGTTCACTCTAGCACTTAACAAGACTGAGCTTGTGGATAAAGAGACCCTGGATTCTTGGAAGGCTAGATTTCGTGACTGGGGCTACCAGCCAATTTTTTGCAGTGTTGAATCCGGACATAACCTTGATCTTCTTGCGTTCCAATTGAAAGATCAAACAACAGTGATTGTGGGTCCTAGCGGTGTTGGGAAGTCTAGTTTGATCAATGCCCTTAGAAGCAATCCCCGTACTTGTGATACTACAGATGGGGAGAATTGGTTTGAACCTATTTTAGGTAGCAAGTGGTTTGAGGACCAACGGGTTGCGGAGGTTTCAACAAGAAGCGGCAGGGGGAAGCATACTACTCGTCATGTCTCTCTGCTTCCATTATCTGGAGGGGGTTATTTTGCCGATACTCCTGGATTTAACCAGCCTAGTTTGTTGAAAGTGACAAAGCAATCTCTTGCACAAACTTTTCCTGAAATCAGGAAAATGCTTGGTGGAAATGAGCCTAAAACATGTTCATTCAACAATTGTTTGCATCTTGGCGAACTTGGCTGCATTGTAAAGGGGGATTGGGAAAGATATTCATTCTATTTTCAACTTCTTGATGAAATTAGAATCCGAGAGGAGTTTCACTTGAGGACATTTGGAACTAAAAGAGAAAGCGATGTAAGgttAAAAATAGGAAATATGGGTTCTAAGCAAGCAGAACCACGTTTGGAGCTTAAGAAGCATAGAAGACAATCTCGGAAGAAGACTAACCAATCTATTTTAGATGACCTGGATGATTACGACAATTTGCTTGACGAGGACAACGATCCCTTTTTAAATGCTACGAGGAACGAAAATCCTTAA 1416 0.4364 MSLASFSIVRHHRTVATAIPQLLRRFSYFQISARQQNPKQDAPSKNLLKAKHTLKNFSSLAPILSREDNPLLSESQAIGIVASSQANFMRVIVQSEPSRTSHDVSGVELLCVVRALLKKIKRRVMVGDKVLVGSVDWVDRRGMIENVFQRNSEILDPPVANVDHLLVLFSLDQPKLEPFTLTRFLVEAESTGIPFTLALNKTELVDKETLDSWKARFRDWGYQPIFCSVESGHNLDLLAFQLKDQTTVIVGPSGVGKSSLINALRSNPRTCDTTDGENWFEPILGSKWFEDQRVAEVSTRSGRGKHTTRHVSLLPLSGGGYFADTPGFNQPSLLKVTKQSLAQTFPEIRKMLGGNEPKTCSFNNCLHLGELGCIVKGDWERYSFYFQLLDEIRIREEFHLRTFGTKRESDVRLKIGNMGSKQAEPRLELKKHRRQSRKKTNQSILDDLDDYDNLLDEDNDPFLNATRNENP 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02720 471 PANTHER SMALL RIBOSOMAL SUBUNIT BIOGENESIS GTPASE RSGA 1, MITOCHONDRIAL-RELATED 66 453 - -
Tsu07g02720 471 Hamap Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 77 396 IPR004881 GO:0003924|GO:0005525
Tsu07g02720 471 Gene3D Probable gtpase engc; domain 3 335 397 - -
Tsu07g02720 471 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 392 IPR027417 -
Tsu07g02720 471 ProSiteProfiles EngC GTPase domain profile. 160 329 IPR010914 GO:0003924|GO:0005525
Tsu07g02720 471 TIGRFAM TIGR00157: ribosome small subunit-dependent GTPase A 124 267 IPR004881 GO:0003924|GO:0005525
Tsu07g02720 471 CDD YjeQ_EngC 160 390 IPR004881 GO:0003924|GO:0005525
Tsu07g02720 471 PANTHER SMALL RIBOSOMAL SUBUNIT BIOGENESIS GTPASE RSGA 66 453 IPR004881 GO:0003924|GO:0005525
Tsu07g02720 471 Gene3D - 148 333 IPR027417 -
Tsu07g02720 471 Gene3D - 72 147 IPR012340 -
Tsu07g02720 471 SUPERFAMILY Nucleic acid-binding proteins 77 150 IPR012340 -
Tsu07g02720 471 MobiDBLite consensus disorder prediction 422 445 - -
Tsu07g02720 471 Pfam RsgA GTPase 147 333 IPR010914 GO:0003924|GO:0005525
Tsu07g02720 471 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 152 331 IPR030378 GO:0005525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02720 K06949 - gmx:100796145 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02720 07 31832916 31836939 Tsu07g02720 07 31832916 31836939 ECH