Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02708 ATGCAAACTAAGAAAAAAGCCTCTAGGCGGAATGGTAGTCGAGAAGTTGGTTCTCCTAGGGTTTCAAGAGCACAGAAGAAGGCCTCTGAAAATGGCCAAGTGGCTAACTTAATTACATCTTCTGCAAGAAAGATTAAACCTTCCTGCGCTCTTGAAGATAAAGCTGGAGAGCCAACGCCCCAAACTTTTTTGAGTAACGAGTGCAGCACTGTGGACAAGGGGATTTCCAGTACTAATCTGGGAAATGAAGCAGTTGATGGTGCTTCAGTAGATTTTCAGGGTTGTAACAAGCAAGCCGTACCTCCGGAGACTGGAACTTTATTCTCTCCTGGGTTTCACTTATCCAAAGGTTCAGTTACTGACAGAGttgattttgtcaaaatatttCGGTGCGACGATCAACAAAGAATTTCTCTCGACCAAGAAGTAACACAAGGAGATGGCCATGTTAGTCATGATTCTGACTCTGCCATGGAAGTAGACATAAACAATTCATCAAATGTTGCTTTAAGCACAAAAACTGTTAATGGTTGCAATTCTGATTTTGATGGAAATGCTCTTTCCGTGGAAGTTCCTACCATGTATCTTTCCATGAAAAACTCAAAGCTGGAATGTGTTGACGAGCATGGTCAGGACTCTATATCCTCTGATATGTGCCCAGAGGATGACGAATTTGAGGATTTTGACGATTTTGACCCTTACTTATTCATAAAGACCTTACCAGACTTGTCAAAGGTTGTTCCCACATTTAGACGGATGTTGCTACCTAAGCAGACTCGGAGCTGCCCTCCTATTACTCTTGTCCTGGACTTGGATGAAACTTTGGTGCATTCTTCCCTTGAACCTTGCGAGGATGTAGACTTTACTTTCACTGTGAATTTTAATTCTGAGGAGCACATTGTCTATGTACGCTGCCGTCCTCACCTAAAAGAATTCCTCGAGAGAGTTTCTGGtctttttgaaattattatatttacaGCTAGTCAAAGTATTTATGCTGATCAACTCCTAAATGTGCTTGATCCTAAGCGGAAGATATTTCGCCATCGTGTGTTCCGTGAATCCTGTGTTTATGTGGAGGGGAATTACCTCAAAGATTTAACAGTGCTCGGTCGTGATTTAGCACATGTTATAATAATTGACAACTCCCCACAGGCGTTTGGGTTCCAAGTGGACAATGGAATACCAATTGAGAGTTGGTTTGATGATCCTTCAGATAGAGAATTGCTTTTATTGATCCCTTTCTTGGAGAGTTTGGTAGGAGTTGATGATGTCCGGCCCAAAATTGCAAAAAGGTTCAAGCTCCGGGAGAAAATAGCTGCAGCTGTGCATCCTTTAAATACAAATAGAAGGGATTTCTTGTCTGAATAA 1371 0.4106 MQTKKKASRRNGSREVGSPRVSRAQKKASENGQVANLITSSARKIKPSCALEDKAGEPTPQTFLSNECSTVDKGISSTNLGNEAVDGASVDFQGCNKQAVPPETGTLFSPGFHLSKGSVTDRVDFVKIFRCDDQQRISLDQEVTQGDGHVSHDSDSAMEVDINNSSNVALSTKTVNGCNSDFDGNALSVEVPTMYLSMKNSKLECVDEHGQDSISSDMCPEDDEFEDFDDFDPYLFIKTLPDLSKVVPTFRRMLLPKQTRSCPPITLVLDLDETLVHSSLEPCEDVDFTFTVNFNSEEHIVYVRCRPHLKEFLERVSGLFEIIIFTASQSIYADQLLNVLDPKRKIFRHRVFRESCVYVEGNYLKDLTVLGRDLAHVIIIDNSPQAFGFQVDNGIPIESWFDDPSDRELLLLIPFLESLVGVDDVRPKIAKRFKLREKIAAAVHPLNTNRRDFLSE 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02708 456 SUPERFAMILY HAD-like 254 430 IPR036412 -
Tsu07g02708 456 SMART forpap2 263 407 IPR004274 -
Tsu07g02708 456 CDD HAD_FCP1-like 264 397 - -
Tsu07g02708 456 ProSiteProfiles FCP1 homology domain profile. 260 419 IPR004274 -
Tsu07g02708 456 PANTHER INTERACTING FACTOR, PUTATIVE, EXPRESSED-RELATED 1 442 - -
Tsu07g02708 456 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 1 442 - -
Tsu07g02708 456 MobiDBLite consensus disorder prediction 1 37 - -
Tsu07g02708 456 TIGRFAM HIF-SF_euk: dullard-like phosphatase domain 266 428 IPR011948 GO:0016791
Tsu07g02708 456 Gene3D - 250 433 IPR023214 -
Tsu07g02708 456 Pfam NLI interacting factor-like phosphatase 266 426 IPR004274 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02708 Tsu-Chr7 31734541 31739452 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02708 K17616 K12778 gmx:100798665 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02708 07 31734541 31739452 Tsu07g02708 07 31734541 31739452 ECH