Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02700 ATGTACGGATCGGAGAATAACCGGGAAGATTCAGAGCCAACGGCTTTCAGAAGAGCAGAGAAGAACTACAAGCTCTACTACGATAACAATGCTTCATTCAAGAACAAAaaGAATAATAAAAAACCCAAACCAGTGGACTTAACGGAAGTACTTGACTTCAGATCAATTCTAGAATGCCATCACCGGAACGGTGAACTTCCTCATGGTGTTATTGTTCTTCAGGATAAGTTCAATTCTCCAGTGTTCTCTTTGCAAAATCACCCTGGTTTTTATTTTATCCCTGGGGCATTAAGTATAGAGAAACAATGTGATTTGATAAGGGAGAGTTTGATTGATTTTCCGCAGCCACCGAACAGAACAAATCACAATGCCATATATGGTCCTAtacacaatttgttttttgcGGCTAAAGAGGGGAAAGTTTTGGTTGAAGATAAATCTCTAATTACTTCGAATGAACCTAGTCTTGATTCTGGTTGTAGGGACGGTGAGGAATGGAAGTTTACCACAGAAAAGGAAGCGTCCTTGAGAAAATTCAAATCTGTTTCTGGTTCTTCTTTGCTGCGAAAGTTGCGATGGAGCACCCTTGGCCTACAGTTTGATTGGTCTAATCGAAATTATAATGTGTCACTCCAACATAACAAAATCCCTGAAGCACTCTGTGAGCTTGCCAAACAGTTGGCAAAACCAGCATTGCCTGCTGGTgttgaattccagcctgaagcTGCAATAGTAAATTACTTCGCATCAGGGGACACACTGGGTGGCCACCTTGATGATATGGAAGCAGATTGGAGTAAGCCCATAGTTAGTTTAAGCTTGGGCTGTAAAGCTATTTTTCTTTTGGGAGGAAAATCTAGAGAGGATGCTCCCATAGCAATGTTTCTTCGAAGTGGTGATGTTGTACTCATGGCTGGAGAAGCAAGGGAATGCTTTCATGGTGTTCCTCGGATCTTCACTGATAAAGAAAATGCTGAAATAGGCCATCTTGAAAAACAGCTGACGCAGGAAGATGATCTTTGTTtcctaaaatatattcaaacTTCAAGAATCAACATCAATATCAGACaagttttttaa 1080 0.3861 MYGSENNREDSEPTAFRRAEKNYKLYYDNNASFKNKKNNKKPKPVDLTEVLDFRSILECHHRNGELPHGVIVLQDKFNSPVFSLQNHPGFYFIPGALSIEKQCDLIRESLIDFPQPPNRTNHNAIYGPIHNLFFAAKEGKVLVEDKSLITSNEPSLDSGCRDGEEWKFTTEKEASLRKFKSVSGSSLLRKLRWSTLGLQFDWSNRNYNVSLQHNKIPEALCELAKQLAKPALPAGVEFQPEAAIVNYFASGDTLGGHLDDMEADWSKPIVSLSLGCKAIFLLGGKSREDAPIAMFLRSGDVVLMAGEARECFHGVPRIFTDKENAEIGHLEKQLTQEDDLCFLKYIQTSRININIRQVF 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02700 359 Gene3D - 141 358 IPR037151 -
Tsu07g02700 359 PANTHER ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB 1 359 - -
Tsu07g02700 359 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 239 359 IPR005123 -
Tsu07g02700 359 Pfam 2OG-Fe(II) oxygenase superfamily 177 356 IPR027450 -
Tsu07g02700 359 SUPERFAMILY Clavaminate synthase-like 88 358 - -
Tsu07g02700 359 PANTHER ALKYLATED DNA REPAIR PROTEIN ALKB-RELATED 1 359 IPR004574 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02700 K10765 - gmx:100797068 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02700 07 31629961 31633995 Tsu07g02700 07 31629961 31633995 ECH