Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02686 ATGGAAGGGTTGGCCATGCTCAAGTACCTCATCTCTCACCTTCACCAACTCTtcgattcttcttcttcttcttcttccattcttcttcttcaacaacaacctTCTATTCCCACCACCATCTTCCTCCAACCACACCCCCCTCTTCCTCCTCCTACTACTACCACCAGATGGACCTCCTTTGATAGTGAAGATAGCTCTGTAGATGACTGTTGTGACCTTGTAATGGCAGCTGGAAAGTCTCATAGTTTCAGGATGTCGGAGCCTCTAAAGTCTCCACCTGCTAAGAAGCCTCGAAAAGATCGAAGTAAGGGCAAATCGTTAGGAAGATCCTGTACAAGTGAAGTTATGGAACAAGAAATCTGGAAAGATTTTCCTGAAGATTTATTTGAGGCTGTAATTGCACGACTTCCCATTGCGGCATTTTTCCGCTTCCGCTCTGTGTGCCGGCAATGGAATTCCTTGCTGGCTTCTCAAAGCTTTTCTCAGCACTGTGCCCAAGTCCCACAAGAAAATCCATGGTTTTACACCATAACCCATGAAAATGTGAATTCAGGAGCCATGTATGATCCTTCTTTGAAAAAGTGGCATCACCCGTCTATATCACCACTGCCCACAAAGTTGATCGTTTTGCCAGTGGCTTCAGCAGGGGGTTTAGTTTGTTTTCTTGACATTGGCCACCGTAACTTCTATGTGTGTAACCCGCTGACTCAATCCTTCAAGGAGTTGCCAGCTCGTTCGGTTAAGGTCTGGTCTCGCGTTGCTGTAGGGATGACGGTAAATGGAAATTCAGCTGGTTCAGGCTACAAGATCCTATGGGTCGGTTGTGATGGAGAATATGAAGTTTATGACTCGGTGAAAAACACTTGGAATCGTCCGGGAAACATGCCTGGAAGTGTGAAGCTGCCATTGTCCCTTAACTTTAGGTCACAAGCTGTCGCTATTGACAGCACACTTTACTTCATGCGTTCCGATCCAGAAGGGGTTATTTCCTATGATGTGGCAACAGGGGTTTGGAAACAGTACATAATCCCAGCGCCGCTGCATCTGACCGATCACACTCTGGCTGAGTATGATGGTCAGATCATGCTTGTGGGGTTGCTCACAAAGAATGCAGCCACATGTGTATGCATATGGGAGCTGCAGAAAATGACACTCTTGTGGAAGGAGGTAGACAGAATGCCAAATATATGGTGCTTGGACTTTTATGGTAAGCACGTTAGAATGACTTGCCTGGGGAACAAAGGCTTGCTCATGTTGTCCTTGAGATCAAAACAAATGAATCGGTTGGTTACTTACAACATAGCGAGGAAGGAATGGCTGAAGGTTCCCGGATGTGTGGTCCCGCATGGGAAGAAACGGCAGTGGATAGCATGTGGTACTGCATTTTATCCATGCCTGACTGCTGTGGCTTAA 1413 0.4515 MEGLAMLKYLISHLHQLFDSSSSSSSILLLQQQPSIPTTIFLQPHPPLPPPTTTTRWTSFDSEDSSVDDCCDLVMAAGKSHSFRMSEPLKSPPAKKPRKDRSKGKSLGRSCTSEVMEQEIWKDFPEDLFEAVIARLPIAAFFRFRSVCRQWNSLLASQSFSQHCAQVPQENPWFYTITHENVNSGAMYDPSLKKWHHPSISPLPTKLIVLPVASAGGLVCFLDIGHRNFYVCNPLTQSFKELPARSVKVWSRVAVGMTVNGNSAGSGYKILWVGCDGEYEVYDSVKNTWNRPGNMPGSVKLPLSLNFRSQAVAIDSTLYFMRSDPEGVISYDVATGVWKQYIIPAPLHLTDHTLAEYDGQIMLVGLLTKNAATCVCIWELQKMTLLWKEVDRMPNIWCLDFYGKHVRMTCLGNKGLLMLSLRSKQMNRLVTYNIARKEWLKVPGCVVPHGKKRQWIACGTAFYPCLTAVA 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02686 470 SUPERFAMILY Galactose oxidase, central domain 185 449 IPR011043 -
Tsu07g02686 470 Gene3D - 121 160 - -
Tsu07g02686 470 MobiDBLite consensus disorder prediction 82 110 - -
Tsu07g02686 470 PANTHER BNAA07G08860D PROTEIN 52 469 - -
Tsu07g02686 470 ProSiteProfiles F-box domain profile. 118 163 IPR001810 GO:0005515
Tsu07g02686 470 PANTHER F-BOX/KELCH-REPEAT PROTEIN 52 469 - -
Tsu07g02686 470 SUPERFAMILY F-box domain 116 204 IPR036047 GO:0005515
Tsu07g02686 470 Gene3D - 163 456 IPR015915 GO:0005515
Tsu07g02686 470 Pfam F-box domain 121 159 IPR001810 GO:0005515
Tsu07g02686 470 SMART fbox_2 124 164 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02686 Tsu-Chr7 31411329 31415070 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02686 - - gmx:100810179 789.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g02686 07 31411329 31415070 Tsu07g02686 07 31411329 31415070 ECH