Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02643 ATGGCTGATTCAAAGGGATGGTTAAAAACTCTAAATATCTGTGACACTTTTGGGTTGAAAGATCATGGAGAATATGGAACTCTGGCTGCTATAGTTATAGGCTTCCTTGTTCCGGTTTTATTTGCGTTTTTGTTTCTCGGAAAGAAAAGAGGTAAAGTAAGAGGTGTTCCTGTACGAGTTAGCGGCGAGTCGGGTTATGCTGTTCGTAATGCTCGCTATTCTGAGTTGGTTCAAGTTCCTTGGAAAGGAGCCCCAACCATGGCTCATCTTTTTCACCAATCATGTGATAAACATACTCATAATAAATTTCTTGGAACAAGAAAACTAATAGGAAAGGAGTTTGTTACATCCACTGATGGCAGGAAGTTTGAGAAAGTTCACTTAGGAGACTATGAATGGGAAACCTATGGAGAGGTTTTTGCTCGTGTGTCTAATTTTGCGTCTGGTCTTCTTAAGTTAGGCCATAATGTAGATAGTCGCGTTGCCATTTTCTCTGATACTCGGGCTGAGTGGCTCATTGCCCTCCAGGGTTGCTTCCGGCAGAATTTAACAGTAGTCACTATTTATGCTTCTCTAGGTGAGGAAGCTTTAATCCACTCGCTAAACGAGACCCAAGTATCTACTCTGATCTGTGACGTAAAGCTGTTGAATAAGTTGGAGGCAATAAGATCAAAACTAACATCTTTgcaaaatataatttacttCGAAGACGATAGCAAAGAAGAGCATGTTTTTTCAGAAGGTTTGAGCAACTATATAATTGCTTCTTTTGGTGAAGTTGAAAAACTTGGGAAAGAAAGTCCTGTCGAACCAAGCTTGCCTTCTAAGAATTCTGTTGCAGTTGTTATGTACACAAGTGGCAGCACAGGTCTGCCAAAGGGTGTCATGATTACTCACGGGAACATTGTAGCCACCACCGCAGCTGTGATGACAGTCATTCCAAATCTAGGTAGCAAGGATGTGTACTTGGCGTACTTGCCCCTTGCTCATGTTTTTGAAATGGCAGCAGAGTCTGTTATGCTGGCTGCAGGTGTTGCAATTGGTTACGGCAGTCCTATGACTTTGACCGACACAtctaataaaattaagaaaggAACCAAGGGAGATGTTACTGTCTTAAAGCCCACCCTCTTGACAGCGGTACCAGCTATTATTGATCGTATTCGAGATGGAGTTGTAAAAAAGGTGGAGGAAAAAGGGGGACTTGCCAAGAATCTTTTCCAGATTGCCTACAAGCGGCGTCTGGATGCTGTAAAAGGAAGCTGGTTAGGAGCTTGGGGATTGGAGAAATTGGTTTGGGATACcattatctttaaaaaaattcgtACCGTACTTGGAGGCAACCTCCGATTTATGCTTTGTGGAGGAGCTCCTTTATCCGGAGATTCACAACAATTCATCAATATCTGTGTGGGGGCTCCTATTGGGCAAGGGTATGGTTTGACCGAAACATTTGCTGGGGCTGCATTCTCTGAGGCGGATGACTACAGTGTGGGGCGTGTTGGTCCACCTCTGCCTTGTGGCTACATTAAGCTTGTTTCTTGGGAAGAAGGAGGGTATCTGTCATCAGACAAACCAATGCCACGAGGAGAGGTTGTAGTTGGTGGATTCAGCGTGACAGCTGGTTATTTTAAGAATGAAGATAAAACTAATGAAGTGTTCAAGGTTGATGAGAAAGGTTTGCGCTGGTTTTATACTGGTGACATTGGGCGATTCCATCCTGATGGTTGCCTCGAAATCATCGATAGGAAGAAGGATATTGTCAAACTTCAGCATGGAGAATATATCTCTCTTGGAAAGGTTGAGGCAGCGTTAGCATCATGTGATTATGTGGATAGTATAATGGTGCATGCAGACCCCTTTCACAGTTACTGTGTTGCTCTAGTTGTTGCTTCACGCCAGCCCCTGGAAAAGTTGGCCCAAGAAACTGGTATCGAATACAAAGATTTTCCTGATCTCTGTAACAAACCTGAAGCTGTTACTGAGGTCCTGCAGTCGATTTCCAAGGCTGCAAAAGCTGCAAAGCTGCAAAAAACTGAAATTCCTGCAAAGATTAAGTTGTTGGCGGATCCATGGACACCTGAATCTGGATTAGTTACTGCTGCTCTCAAGTTGAAGAGAGAACAGCTGAAAGCCAAATTCAATGATGATCTTCTGAAGTTGTATGCATGA 2172 0.4254 MADSKGWLKTLNICDTFGLKDHGEYGTLAAIVIGFLVPVLFAFLFLGKKRGKVRGVPVRVSGESGYAVRNARYSELVQVPWKGAPTMAHLFHQSCDKHTHNKFLGTRKLIGKEFVTSTDGRKFEKVHLGDYEWETYGEVFARVSNFASGLLKLGHNVDSRVAIFSDTRAEWLIALQGCFRQNLTVVTIYASLGEEALIHSLNETQVSTLICDVKLLNKLEAIRSKLTSLQNIIYFEDDSKEEHVFSEGLSNYIIASFGEVEKLGKESPVEPSLPSKNSVAVVMYTSGSTGLPKGVMITHGNIVATTAAVMTVIPNLGSKDVYLAYLPLAHVFEMAAESVMLAAGVAIGYGSPMTLTDTSNKIKKGTKGDVTVLKPTLLTAVPAIIDRIRDGVVKKVEEKGGLAKNLFQIAYKRRLDAVKGSWLGAWGLEKLVWDTIIFKKIRTVLGGNLRFMLCGGAPLSGDSQQFINICVGAPIGQGYGLTETFAGAAFSEADDYSVGRVGPPLPCGYIKLVSWEEGGYLSSDKPMPRGEVVVGGFSVTAGYFKNEDKTNEVFKVDEKGLRWFYTGDIGRFHPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALASCDYVDSIMVHADPFHSYCVALVVASRQPLEKLAQETGIEYKDFPDLCNKPEAVTEVLQSISKAAKAAKLQKTEIPAKIKLLADPWTPESGLVTAALKLKREQLKAKFNDDLLKLYA 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02643 723 SUPERFAMILY Acetyl-CoA synthetase-like 84 720 - -
Tsu07g02643 723 Pfam AMP-binding enzyme 124 591 IPR000873 -
Tsu07g02643 723 ProSitePatterns Putative AMP-binding domain signature. 282 293 IPR020845 -
Tsu07g02643 723 Gene3D - 85 583 IPR042099 -
Tsu07g02643 723 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 30 722 - -
Tsu07g02643 723 PANTHER LONG CHAIN ACYL-COA SYNTHETASE 8-LIKE 30 722 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02643 Tsu-Chr7 30818139 30825866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02643 47 723 Acyl Lipid Metabolism Gene Families AT2G04350 71.534 0.0 1030
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02643 K01897 - gmx:100803126 1237.25