Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02601 ATGTGGACGAACGTTTTCAAAAttGGTAGTCTGCATCAGATATCATGGTTTCAGTTTCTCCCTCACGAACCTGATCTGAACCCTCTACCTGACAAAAGTGTAAAAGCGGACCAGAAGGATGCTGCAATGTTGCTGGTGCTTTCATCACATCTGCAACTACAGAAGGAAGGTTTTCTCAGCGCATGTACCAATTCCTTTGTTGGACCCTGGGATCCATCTCAGGGTTTACATAATCCTGATGAAAAGATTAAGCTGTGGCTTTTTCTTCCAGGGCGTCATTCATCAGTTTCTGAAAGTGCTCAGCCAGCATTATCCGGATTAAGAGTTGTTGCGTCTGGGCTCTGGGTTGCTCCTGGGGATTCAGAAGAGGTAGCTGCTGCTCTGTCTCAGGCTTTAAGGAATTGCATAGAAAGAGCACTGCTTGGGCTTTATTACATGAGATTTGGAGATGTATTTTCAAAGGTCCATCAATTTCAAAGTGAAGAACTGCTCAGGAGAGGACACCCTGCATTTGAGTTTATCTTTGCTGCAACAGAGGAGGCAATCTTTATACATGTCATAGTGTCCTCAAAGAATATCCGAATGCTTTCAACCGGTGATCTAGAAAAACTATTGAAACATTCTACGGAGACAACATATAGACTTCCAGTTATTGTTTCTCCTCATGGAATACGTGGCAGCCTGACTGGTTGTTCATCAAGCGATCTTGTCAAGCAAAGTTATTTCAGCAGTTCTTCCAAATTAAGGGTGTCAAATGGAATTATAGGTCTCCCATATCATGTTTCCCAGGGTGTTGGTTGCCAGCTGAGGGGGCAGAATTGTTTTGTTGAAGTGAGCCTCGGCTTCCCTAGATCTGAAACTGACAAGGCGTTGcagtcaaacaaaaatattgttagGAATTTACCCAAATCTCCTGTCATGGGACACAGTGACCACAAGGGATCACAAGATCATTTGTCAGATAATGAGAAAACATTCCTCTATCCAGCTGAGTCAGTACTTGTACCAGTTTTTCAAACATCGTTAGCTAGGTCCTCTTTGAGAAGATTTTGGCTGCAGAATTGGATGGGTCCATCCCTGACTGGTTCCTCATCCTTTATTCACTGTGCCGGTAATGTGGAATCTACTGACGATCCTTGGAATGAATACAATGGATCCCGAACTCAAAATAGTTATGATAGTAGTAGCAATAGCAACAATAGCAGTATCAGTAGCTTAAGTGCCAGTGATAGTGATAGCGATTACAAGATTACAGGAACAAGTGAACTAGAGGCAGATGCTGATTCTTTAGCGTGTAGACAGTCTATGATATCTTCCGCCGATCGGTTGGGAAGTGATGGCCCCAAATTGGGCTCTAAGCGGTCTCGAACAGGAGTGACGGCTACAAATATTCCTGGGCAAGATGCATACATGTCTGATTTTGGTTCCATAGAAGTTAACAATTCTGTCATTACAAGTTTTGATGAGCCAATTGGGTCTTACTGGGACTGGGGTGATAATGATGAGGAGAATAAAGGCATGGTAATGGATATTGGAGCTCTTTTATCCGAGTTTGGTGGTTTTGGTGACttctttgaaaatgaaaaattgcctTTTGGAGAGCCCCCAGGAACTGCTGAATCTCAGGCACTTGTGTTGTCTGCCCCGGATTGTGGAGATTTCAACAGCAGTCCAGTTGGTGCCAATGTGATGGATATTTCAGATCAAATTTTTTTGCCTGTTGGGTTTTCTTCCTTTGAGAGTTTTAATCCAACTCCTCCAGCAGTCATGGAGGAATGCGTTAACAAAGATCAAGATAACTTGAATAACTCCATGTCAATGGATCCAACTAATCAAACTCAAATGTTGTATACAGGGGAGTTTGATCATATAATTAAAGCAGAAGCAATGATGACATTTGCTCCTGAATTTGGAGCTGTTGAGGCTCCTACTAGTGGGTTATCCACAGCATTATTCAGAAGCCCATATTTTCCAAGGTCTCGAAAAGCAGAGAGTTCAAATTCTTGTTCAAACAATTACTTGTATGGTGCAGAGCCACCTTCTTCTCCCTGTATTGAAGGATCAGAGGGGAAAAATGGACTGGTTATCAATGCAAAAACATGTTCTGGAAAACATGATACAAGTATGACTCTCCACGCAAAAAATTACTATACTTTTGTGGAGAGTAGGAAAGACATAAATGACAAAAAACCAGTCGCATCTGTTGTTAACAGCATTGCTAAATCTGAGGGGATAGTACAACCTCCGTTCTCGAATATTGGTTCTAATGCCTCTGTCAAGTCCGTTTTAAGGAAGATGACTGAAGGCACAAAGGACGCAGAGCATTTCAGTCTATCTGCAAAAACTTTATTGGCAACTGATGTTACCTGTGCTATGTTGCAAGCTTCCATGTGCAGGTCACGACACACTCTCTTATCTTCTGGTAACAACCTCATTTCTGTTGGTTTGCATAGATCCACCGGGGTTACATTTTCTAATCAGCTTCCTACTGACCCGAGTACCACCACAGACAACATATCTGGCAAGTACGaggtgaaaaagaaagaaaatataccGGTTAGGATTGCAGGTGATATTGATGGAGGAGTGCTTGATGGACACCTCAATGCACCCGTTGGTGTTTGGCGCTCTGTAGGAGCTTCAAAAGTCGTAAAACCTTCCAATTCACCAAACATGGAAGTTGGCCCTTCCTTTTCCCATAATTCATTCAATGAAGAAGGCATCCTTTCTTATGTTCAAAGAAAACCCCTTCAGGAACTTCTTGATGGTATTGCATTGCTTGTCCAACAGGCTACTTCCTTTGTTGATCTGGCCTTGGATGCGGATTGTGGTGATGGTCCTTATGGTCTGCTTGCGTTGCAAGAACAGTGGAGGCGTGGGTTTTGTTGTGGGCCTTCAATGGTCCATGCTGGTTGTGGGGGAACTCTTGCCTCTTCTCATTCGTTGGACATTGCTGGCTTGGAGTTGGTGGATCCACTTTCTTCTGATGTTCATGCATCTACTGTGGTCAGTTTGTTGCAATCTGACATAAAAACAGCATTAAAGTCGGCATTCTCCAATTTAGAAGGACCCTTATCTGTGACTGATTGGTGCAAAGGACGCAACCAATTAGGTGATACTGGAAGTATAGTTGATGGAGTTTCTGCTGAATCCAGCATTAGTGAATGTAGGGATTCTTCGGAACCATTGAGTCCATCCCAATCATCTGTTTGTGGATCATCCAGTTTTAAAGTTTCCAGCATGATGGATACTGCCAAGGTGGATGATTCCCAAAGGAGATCTGGTCAAGATATGTGCAATTCAGAATCAGAGCAGCACCTGTGTTCCCGGCTCAAACCTACCCTCATTGCTGTTCCATTCCCTTCTATACTTGTAGGGTATCAGGATGATTGGCTCAAGGCATCGGCAAACTGTCTGCAGCACTGGGAAAAGGCTCCTCTAGAACCTTATGCTCTGCAGAAACCTATTACGTATCATGTTGTATGTCCCGACATTGATCCCCTTACTTCTGCTGCTGCTGATTTTTTTCAACAACTAGGAACAGTCTATGAGATGTGCAAGCTAGGTACCCATTCACCTATGGTCTTGGGGAATCAGATGGAGATAGAGTCTGCGAAGTCATCAACTTGTGGTTTTGTTTTACTTGATTGTCCCCAATCAATGAAGATTGAGAGCAGCAATGCATCTCTGGTTGGGTCAgtaagtgattattttttatctttatcaaATGGTTGGGACCTGACTAGTTATCTCAAGTCTCTTTCGAAGGCGCTGAGAGCTTTAAATCTGAGCTCTTGTTTTTCTGCGAACCCCACTGAAGGAAGTAACAGTTCGTGTTTGGTAATCTATGTGGTGTGCCCGTTTCCTGATCCGTCTGCAATTTTGCAAACTGTTATTGAATCATCTGTTGCCATTGGATCAGTTATCCAACAGTCAGATAGAGAGAGGAGATCTAGCTTGCATAATCAGGTTGTAAAGGCACTGAGTGGTTTGGCAACTGTTGATGAAGCTTCAGCATCTAATATTCCTGTGCTTTCTGGGTTTAGTATTCCTAAATTGGTCTTGCAGATAGTTACAGTTGATGCCATTTTCAGAGTCACAAGTCCATCAGTGAGTGAGCTTGTCATTTTAAAAGAGACCGCCTTTACGGTGTACAGCAAGGCTCGTCGCGTTTCACGTGGCATCTCTAGTGATTCATCTCAATTGGCATTTTCTAGCAGATCTCAGTCTGTTTTGCCACAAATGCCTTCTCCCATCTCTGGGATGTGGAAAGACTGTGTTGGTCCTCGGATGGCAGGACATTCAATACCAAGAGAGAGTGACATTGATACTAGCTTGAGACCTGGTAATTGGGATAATTCTTGGCAACCGACAAGGTCTGGGGTTCTGAACTGCGATCCAAGTAGAACTGGGGATATCTTTCCTCATGATGAAATTCGCTACATGTTTGAACCCCTTTTTATTCTTGCTGAACCAGGTTCTTCAGAACATGGTATTTCAGTTATTGGTAGCCCCAGTTCTGAAGCTTCCAAGGCACTGGCAGATGATAGTAGTGGTAACCATGTGCAGAGTGCAAGTACAGCGGGGAGTGTGGATTCTACTTCAAGTATTGATGGATCTGGGTCTGATCAAAAGACTCATCCAAGCTTACATTGTTGCTATGGATGGACAGAGGACTGGCGTTGGCTTGTATGCATCTGGACAGATTCAAAGGGAGAATTGCTTGACTCTAATATTTTCCCCTTTGGTGGAATAAGCAGTAGGCAGGATACAAAAGGCCTACAGTGCCTTTTTGTTCAAGTTCTTCAGCAAGGTTGTCTGATACTTCAATCTTGTGATCCCGGCCTTGCAAAGCCTCGAGATTTTGTGATAGCACGCATTGGAGGTTTCTATGAGCTCGAGTACCTTGAGTGGCAGAAAGCTATTTATTCAGCTGGTGGATCTGAGATGAAGAGGTGGCCCCTGCAACTCCGTAAGTCTCTGTCTGATGGAGTGTCATCAACTAGTAATGGTTCTTCTTTGCAACAACCAGATATGAGTTTGATGCCAGAGAGAACACTTCCTTCCTCCCCTAGTCCTTTGTACAGCCCTCATCCCAAACCAACTGGTTTTATAAAAGGCAGTTTAGGGCAATCTGCTTCAAGAAAGCAGATAATGGGTGGACATTCTATGGTTGACAGTTCAAGGGGTTTGCTTCATTGGGCACAAAGCATTAGCTTTGTTGCAATTTCTATGGACCATACGCTACAACCAGTTCTCCCAGCCGATTCATCATCTCCTGGTTATGTAGAAGGTTTCACTCCAGTGAAGTCTCTTGGTTCTGCATCTTCTGCATATATTTTAATTCCTTCTCCCAGCATGCGGTTCCTTCCTCCAACATCTCTTCAACTCCCCACATGCCTCACTGCCGATTCTCCGCCTCTAGCTCATTTGCTTCACAGCAAGGGTTCAGCTCTTCCGCTCTCCACAGGATTCGTGGTTTCAAAAGCAGTTCCTTCCATGAGGAAGGACTATAGAAGCAACCTGAAAGAAGAATGGCCTTCAGTACTTTCAGTGAGCCTCATAGATTATTATGGAGGTTCTAACATCCCCCAAGAGAAGACTGTTCGAGGTATTAACAAGCAAGCTGGTAGAGGCTTGAGCTGGGAAGCTAAAGATTTTGAAACTGAGTCACACTTGATTCTAGAGTCCCTTGCAGCAGAGCTTCATGCCTTGTCATGGATGACAGTCAGCCCCTCATACCTAGAACGACGAACAGCACTTCCGTTCCATTGTGACATGGTTCTAAGACTAAGGAGACTTCTTCACTTTGCCGATAAAGAGCTCTCTAAACAGTCAGAGAAATcttga 5850 0.4316 MWTNVFKIGSLHQISWFQFLPHEPDLNPLPDKSVKADQKDAAMLLVLSSHLQLQKEGFLSACTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHSSVSESAQPALSGLRVVASGLWVAPGDSEEVAAALSQALRNCIERALLGLYYMRFGDVFSKVHQFQSEELLRRGHPAFEFIFAATEEAIFIHVIVSSKNIRMLSTGDLEKLLKHSTETTYRLPVIVSPHGIRGSLTGCSSSDLVKQSYFSSSSKLRVSNGIIGLPYHVSQGVGCQLRGQNCFVEVSLGFPRSETDKALQSNKNIVRNLPKSPVMGHSDHKGSQDHLSDNEKTFLYPAESVLVPVFQTSLARSSLRRFWLQNWMGPSLTGSSSFIHCAGNVESTDDPWNEYNGSRTQNSYDSSSNSNNSSISSLSASDSDSDYKITGTSELEADADSLACRQSMISSADRLGSDGPKLGSKRSRTGVTATNIPGQDAYMSDFGSIEVNNSVITSFDEPIGSYWDWGDNDEENKGMVMDIGALLSEFGGFGDFFENEKLPFGEPPGTAESQALVLSAPDCGDFNSSPVGANVMDISDQIFLPVGFSSFESFNPTPPAVMEECVNKDQDNLNNSMSMDPTNQTQMLYTGEFDHIIKAEAMMTFAPEFGAVEAPTSGLSTALFRSPYFPRSRKAESSNSCSNNYLYGAEPPSSPCIEGSEGKNGLVINAKTCSGKHDTSMTLHAKNYYTFVESRKDINDKKPVASVVNSIAKSEGIVQPPFSNIGSNASVKSVLRKMTEGTKDAEHFSLSAKTLLATDVTCAMLQASMCRSRHTLLSSGNNLISVGLHRSTGVTFSNQLPTDPSTTTDNISGKYEVKKKENIPVRIAGDIDGGVLDGHLNAPVGVWRSVGASKVVKPSNSPNMEVGPSFSHNSFNEEGILSYVQRKPLQELLDGIALLVQQATSFVDLALDADCGDGPYGLLALQEQWRRGFCCGPSMVHAGCGGTLASSHSLDIAGLELVDPLSSDVHASTVVSLLQSDIKTALKSAFSNLEGPLSVTDWCKGRNQLGDTGSIVDGVSAESSISECRDSSEPLSPSQSSVCGSSSFKVSSMMDTAKVDDSQRRSGQDMCNSESEQHLCSRLKPTLIAVPFPSILVGYQDDWLKASANCLQHWEKAPLEPYALQKPITYHVVCPDIDPLTSAAADFFQQLGTVYEMCKLGTHSPMVLGNQMEIESAKSSTCGFVLLDCPQSMKIESSNASLVGSVSDYFLSLSNGWDLTSYLKSLSKALRALNLSSCFSANPTEGSNSSCLVIYVVCPFPDPSAILQTVIESSVAIGSVIQQSDRERRSSLHNQVVKALSGLATVDEASASNIPVLSGFSIPKLVLQIVTVDAIFRVTSPSVSELVILKETAFTVYSKARRVSRGISSDSSQLAFSSRSQSVLPQMPSPISGMWKDCVGPRMAGHSIPRESDIDTSLRPGNWDNSWQPTRSGVLNCDPSRTGDIFPHDEIRYMFEPLFILAEPGSSEHGISVIGSPSSEASKALADDSSGNHVQSASTAGSVDSTSSIDGSGSDQKTHPSLHCCYGWTEDWRWLVCIWTDSKGELLDSNIFPFGGISSRQDTKGLQCLFVQVLQQGCLILQSCDPGLAKPRDFVIARIGGFYELEYLEWQKAIYSAGGSEMKRWPLQLRKSLSDGVSSTSNGSSLQQPDMSLMPERTLPSSPSPLYSPHPKPTGFIKGSLGQSASRKQIMGGHSMVDSSRGLLHWAQSISFVAISMDHTLQPVLPADSSSPGYVEGFTPVKSLGSASSAYILIPSPSMRFLPPTSLQLPTCLTADSPPLAHLLHSKGSALPLSTGFVVSKAVPSMRKDYRSNLKEEWPSVLSVSLIDYYGGSNIPQEKTVRGINKQAGRGLSWEAKDFETESHLILESLAAELHALSWMTVSPSYLERRTALPFHCDMVLRLRRLLHFADKELSKQSEKS 1949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02601 1949 Pfam Mediator complex subunit 13 C-terminal domain 1544 1928 IPR009401 GO:0003712|GO:0006357|GO:0016592
Tsu07g02601 1949 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 13 1 1942 - -
Tsu07g02601 1949 MobiDBLite consensus disorder prediction 300 320 - -
Tsu07g02601 1949 MobiDBLite consensus disorder prediction 1664 1689 - -
Tsu07g02601 1949 Pfam MID domain of medPIWI 1154 1269 IPR041285 -
Tsu07g02601 1949 Pfam MID domain of medPIWI 1273 1390 IPR041285 -
Tsu07g02601 1949 MobiDBLite consensus disorder prediction 377 414 - -
Tsu07g02601 1949 MobiDBLite consensus disorder prediction 1664 1701 - -
Tsu07g02601 1949 PANTHER RAG1-ACTIVATING PROTEIN 1 1 1942 - -
Tsu07g02601 1949 MobiDBLite consensus disorder prediction 1509 1547 - -
Tsu07g02601 1949 Pfam Mediator complex subunit 13 N-terminal 2 336 IPR021643 -
Tsu07g02601 1949 MobiDBLite consensus disorder prediction 440 459 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02601 K15164 - gmx:100782017 3232.97